Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00788 ATGAAGAGAATCTTAGATAGAAGGAAATCTGAGTTATCTAATGAACCCAAAGATGAGGAAAACAATGAAGAATGGTGGAAGCACCCCTGGGTACCTGAAGAGATGGAGAGGCTTAGCATCACTATGTATGATTTTGAGGAAGCAGCTAAGATGGTTCAACCCTCTTCGAGAAGAGAAGGATTTTCTACAATACCAAATGTTAAGTGGGAAGATGTTGGAGGGCTTGACATGTTGAGGAAGGAATTTGACCGTTATATTGTTAGGCGTATAAAGCACCCTGAAGATTATGAGGAATTTGGAGTGGATTTGGAGACAGGATTTTTGCTTTATGGGCCACCAGGCTGTGGTAAAACACTGATTGCCAAAGCTGTTGCGAACGAGGCGGGGGCCAATTTCATACATATCAAGGGCCCTGAACTTCTAAACAAGTATGTTGGGGAAAGCGAATTGGCAGTTCGGACAATATTTAGCCGTGCCCGGACATGTTCTCCATGCGTACTTTTCTTTGATGAGGTGGATGCCTTGACAACGAAGCGAGGCAAAGAAGGGGGATGGGTCGTTGAGCGGCTTTTGAACCAGCTACTCATAGAGTTAGATGGGGCAGATCAGCGGCGGGGTGTTTTTGTCATTGGTGCCACAAACAGACCGGAAGTGATGGACCGTGCCATCTTAAGGCCTGGCAGGTTTGGGAAACTCCTTTATGTCCCTCTGCCCAGTCCCTATGAACGCGGGTTGATCTTGAAAGCTCTTGCTAGAAAGAAGCCTATCAATGCTAATGTGGATTTAATTGCCATTGCACAAAAGGAGGCTTGCAAGAATCTAAGTGGGGCTGATCTTTCTGCAGTGATGAATGAGGCTGCCATGGTTGCCTTAGAAGAGAAACAAATGTTAGGTCAGGGCAGTTCAGATATGAATCCATGGACCATCAAGGCAACACACTTTGAGCGAGCATTGGAGAAAATCTCTCCATCCGTCTCAGACAAGCAAAAGAGTTACTACGACAATCTATCTCAGAACTTGGGAGCATAG 1029 0.4568 MKRILDRRKSELSNEPKDEENNEEWWKHPWVPEEMERLSITMYDFEEAAKMVQPSSRREGFSTIPNVKWEDVGGLDMLRKEFDRYIVRRIKHPEDYEEFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTIFSRARTCSPCVLFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADQRRGVFVIGATNRPEVMDRAILRPGRFGKLLYVPLPSPYERGLILKALARKKPINANVDLIAIAQKEACKNLSGADLSAVMNEAAMVALEEKQMLGQGSSDMNPWTIKATHFERALEKISPSVSDKQKSYYDNLSQNLGA* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00788 342 PANTHER AAA-FAMILY ATPASE 11 340 - -
Eupl02g00788 342 FunFam ATPase, AAA family protein 65 243 - -
Eupl02g00788 342 Gene3D - 65 333 IPR027417 -
Eupl02g00788 342 ProSitePatterns AAA-protein family signature. 207 225 IPR003960 GO:0005524|GO:0016887
Eupl02g00788 342 SMART AAA_5 103 239 IPR003593 GO:0016887
Eupl02g00788 342 Pfam ATPase family associated with various cellular activities (AAA) 108 236 IPR003959 GO:0005524|GO:0016887
Eupl02g00788 342 CDD RecA-like_NVL_r2-like 75 235 - -
Eupl02g00788 342 Gene3D - 238 319 - -
Eupl02g00788 342 Pfam AAA+ lid domain 259 303 IPR041569 -
Eupl02g00788 342 MobiDBLite consensus disorder prediction 1 24 - -
Eupl02g00788 342 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 338 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00788 Eupl-Chr2 9927946 9932940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00788 18 324 Calmodulin-binding Proteins AT3G56690 42.258 1.05e-72 241