Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00781 ATGGCTATCGAACTGGGAGACTGTGCAGCACCTGATGCACTTTTGGAGAATGTGTGGGCCAGCTTCATTGCTGGAACTGCACCGGGTGGAGGAACAGGAAAGACACCTAACTCATCCCAAAATTGGGATGAACTGCCTGGTCTTAATGGGAGAGATGGGTCGATGGGACTTCTACAGAGGCTTCCGAGTCTTGGGAGATGGCTATCTATGGGAGCAGAGAGCTGGGAGGAACTGCTCGATGGAATTATACCTGCAAACAATGTTGAACAGTCTGGTAATCTTGACTCAGAATGCAGTGGGACCAGTTCAGCTTCAAATCCTAACACTCTGAGAGTGGAGAAGGTGGCCACCAAACATTTCAGGGGAGTGAGGAGACGGCCATGGGGGAAGTTTGCAGCAGAGATAAGAGACTCATCAAGGAAAGGTGCTCGAGTTTGGCTAGGGACCTTTGAAACAGCTGAAGAAGCTGCTTTGGCTTATGATAAGGCTGCATTGAGGATGAGAGGACCTCGGACTTACCTCAATTTTCCACTGGAGATGGTTGCTGAGGCTATGGAAAGTACACGTTCAGAACAGGATTTGAATTGTACCTCCACATTTTCTCAAGCAAGTTACAGTACAGAATTCAACGACTCTTACAGCCCATTTCCCAAGTTCACAGAGACATCTTGTAATCATCAAAAAAGGGAAGCACGGGAATGGGATCCAAATGAAGAGATAATAATGATGATTGAACCACCGGCATGGAAGCGACTGGCTAGTATGGAGGAGACATTTACGAATGAAAGCGATGTGGTGGAGTTTCAGGACCTTGGGAGTGATTACTTGGACAGTTTGCTGTCCTCTTTGTGA 852 0.4742 MAIELGDCAAPDALLENVWASFIAGTAPGGGTGKTPNSSQNWDELPGLNGRDGSMGLLQRLPSLGRWLSMGAESWEELLDGIIPANNVEQSGNLDSECSGTSSASNPNTLRVEKVATKHFRGVRRRPWGKFAAEIRDSSRKGARVWLGTFETAEEAALAYDKAALRMRGPRTYLNFPLEMVAEAMESTRSEQDLNCTSTFSQASYSTEFNDSYSPFPKFTETSCNHQKREAREWDPNEEIIMMIEPPAWKRLASMEETFTNESDVVEFQDLGSDYLDSLLSSL* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00781 283 SUPERFAMILY DNA-binding domain 119 179 IPR016177 GO:0003677
Eupl02g00781 283 Gene3D AP2/ERF domain 118 179 IPR036955 GO:0003700|GO:0006355
Eupl02g00781 283 CDD AP2 118 177 IPR001471 GO:0003700|GO:0006355
Eupl02g00781 283 PRINTS Ethylene responsive element binding protein signature 143 159 IPR001471 GO:0003700|GO:0006355
Eupl02g00781 283 PRINTS Ethylene responsive element binding protein signature 120 131 IPR001471 GO:0003700|GO:0006355
Eupl02g00781 283 MobiDBLite consensus disorder prediction 29 48 - -
Eupl02g00781 283 MobiDBLite consensus disorder prediction 31 45 - -
Eupl02g00781 283 PANTHER DNA-BINDING DOMAIN 103 276 IPR044808 GO:0003700|GO:0009873
Eupl02g00781 283 SMART rav1_2 119 183 IPR001471 GO:0003700|GO:0006355
Eupl02g00781 283 Pfam AP2 domain 119 169 IPR001471 GO:0003700|GO:0006355
Eupl02g00781 283 FunFam Ethylene-responsive transcription factor 2 118 179 - -
Eupl02g00781 283 ProSiteProfiles AP2/ERF domain profile. 119 177 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00781 Eupl-Chr2 9837332 9838389 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00781 14 283 AP2-EREBP Transcription Factor Family AT4G18450 35.314 9.85e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl02g00781 AP2 9.4e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00781 - - nnu:104599517 352.443