Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00778 ATGCAGAAGAACGAAGGAGCTGCGGTGCACCAAGCCTGCGCTGCGTGCAAGCATCAGAGGAAGAAGTGTCCTCCAGACTGCGTACTTGCTCCCTTCTTTCCACCGGAGAAGAATCAACACTTCCAAGCGGTGCATAAAGTGTTCGGTGTAAGCAACGTTTCGAAAATAGTGAAGAAACTCGGAACCTATACGGAACGGTGCAACGCCGTCGGTTCTCTCATATGGGAAGCACAGTGTCGACAGGCTGATCCGGTGCTCGGATCTTATGGCGTATATAAGAATATCGTGGACGAGATTAATTTGATTAGGAATCAACGACTCCCAATGCCTGCTGCCGTACCGGAGTCTATGATGTATAAGCCGGATTTGATAGAGTGGAGTAAGAATAATGGAAATACTCTCAATTACATACATGGAAATGAGAACTTTATATTAGAGTACGGCCGTTCATCTCATTCTATCAATGGTCTTAATCACCGTTACTATCTTCCAGATCAATACAGCAGGTCGAACGTAAAGATGGACGATACAATCTGGGATGGAGATGGAGGACCGTAA 558 0.4606 MQKNEGAAVHQACAACKHQRKKCPPDCVLAPFFPPEKNQHFQAVHKVFGVSNVSKIVKKLGTYTERCNAVGSLIWEAQCRQADPVLGSYGVYKNIVDEINLIRNQRLPMPAAVPESMMYKPDLIEWSKNNGNTLNYIHGNENFILEYGRSSHSINGLNHRYYLPDQYSRSNVKMDDTIWDGDGGP* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00778 185 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 105 - -
Eupl02g00778 185 ProSiteProfiles LOB domain profile. 11 113 IPR004883 -
Eupl02g00778 185 Pfam Lateral organ boundaries (LOB) domain 12 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00778 Eupl-Chr2 9816183 9817847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00778 10 129 AS2 family AT1G06280 49.167 2.21e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl02g00778 LOB 5.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00778 - - nnu:104613214 180.644