LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl02g00771	ATGGCGAAGGGTTCGAAGAGCGGTTGCAAGTCTGCGTCTCACCAACTCTTCAAAAATAAGGCTAGGGATCGGGTGGATGATCTTCAAGGGGTGTTTACGGATCTACAACTCGCGAGGAAGGAGAGCCGCACGGGAGACGTGGCTGTTCTGGAGGAGCAAATGAATCAGATACTGCGGGAGTGGAAAGTGGAACTCAACGAACCTTCTCCAGCGTCGTCTCTGCTCGGTGGTAGTTTAGATTCATTCTCGGATATTCACCGTCTGTTGCAGTGCAGCAACGAGGAAGATGATGCAACCAGTGCATTAGCTCCACCAGCCACCCTGAAGTCTGAGCCCCATGTTCAAAGCATTCAAGCGGTGGGAGATACCGCGGTGTTTCATGAGGACTATTTTGTGAATGAGGCACTACAAGAACATGAATTTCAAGGGGATGATCGGTGCAAAGGTTCCCCTTCAAGGGTGCAGCATGAGTTGATGATTAATTTGGAAGTGGCTAATCAGTTAGGCTATCATCAGGTTGATTTGCATCAAAACTTTGACCACAACCTTTTCAATGGTTTCAACTGTACTGGGCAGTGTGGAGAGAATGCTATGCGCGATTCTTCTGGCTCGCTGCCAAGTATCTGCCCTTCACCTTCTGCCTTCTTTGGGCCAAAATGTGGACTCTGGGATTGTCTCAGGTCTGCTCAAGGATTGGAATGGTGTCAAGACTATTGCAGTAGCTTTCATGCTGCTCTAGCCTTGAATGAAGGCCCAATTGGTGTGACTCCAGTTATGCAGCCTGGGGGAATTGGTCTGAAGGATGGTCTACTATTTACTGCTCTCAGTGCAAAGACACAGAGAAAGAATGTTGGTATTCCAGAATGCGAGGGGGTTGCAACAACAAAGTCTCCATGGAAAGCTTGTGATCTCTTCAATCTTTCTCTATTTGAGGGTGAAACAATCAGGGAATGGCTCTTTTTTGATAAACCTCGAAGAGCCTTTGAGAGTGGTAATAGAAAGCAGAGGTCATTGCCAGATTACAGGGGGCGCGGATGGCACGAATCTAGGAAGCAGGTGATGAAGGAATTTGGAGGTCTGAAGAGGTCCTACTACATGGACCCACAACCATTGAACCATTTTGAATGGCACCTCTATGAATATGAGATCAACAACTGTGATGCTTGCGCGTTGTATAGGTTGGAACTCAAGCTCATTGATGGAAAGAAGAGCCCTAAAGGAAAAGTTACTAATGATTCACTAGCTGATCCGCGGAAGCAGATGGGGAGACTAACTGCAGAGTTTCCAGTAACTGTAGATAACAAATGTTCTATTGATGGCAGGACAAAGTTTAATTTAAAGGATGATGCTGGAAATGTTTATTCAGCTTCAAACCAGATGGCCCCTACAAATGACAGCTTTGGTTATGGAGACTATCTTGTAAATGAGGCACCACAAGAACATAAATTTCAAGGGATTGATTTGTGCAATGGCCTCCATTCAGAGGTGCAGCATACGCTGATGAATAACTTGGAAGTGGCTAGTCAGATAAACTATCATCCTTTCGATTTGCATCAAAACTTTGACCACAACCTTTTTAATGGTTTAAATGGTGCTGGGCATTGTGGAGAGGATGCTATATACCATTATTCTGGCTTGCTGCCAAGTATCTCCCTTCGACCTTCTGCCATCTTAGGGCCAAAATGTGCACTCTGGGATTGTTCCAGGCTTGCTCAAGAATCGGAATGGTGTCTAGACTATTGTGATAGCTTTCATGCTGATCTAGCATTAAATGAAGGCCAACTTAGTATGACTCCAGTTCTGCGACCTGGGGGCATTGGTCTGAAGGATGGACCGCTATTTTCTGCTCTCAATGCTAAGTCACAGGGAAAGGATGTTGGTATTCCAGAATGCAGGGGGGCTGCAACGACAAAGTCTCCATGGAATGCTCCCGAGCTCTTTAATCTTTCTGTTCTCGAGGGTGAATCAATCAGGGAATGGCTTTTTTTTGACAAGCCTCGAAGAGCCTTTGAGAGTGGGAGTAGAAAGCAGAGGTCATTGCCAGATTACAGTGGGCGTGGTTGGCATGAATCAAGGAAGCAGCTGATGAAAGAATTTGGAGGTCTGAAGAGGTCCTACTACATGGACCCACAACCATTTAACCGTTTTGAATTGCACCTCTACGAATATGAGATCAACAACTGTGATGCTTGCGCATTGTATCGGTTGGAACTCAAGCTCATCGATGGAAAGAAGAGCCCCAAAGGAAAAGTTAATAATGATCCACTTGCTGATCTGCAGAAGCAGATGGGGAGGTTAACTGCAGAGTTTCCAGTACCAGTAGATAATAAACGTTCTGTTAAGGGCAGACAAAGGTTAATTTAA	2364	0.4556	MAKGSKSGCKSASHQLFKNKARDRVDDLQGVFTDLQLARKESRTGDVAVLEEQMNQILREWKVELNEPSPASSLLGGSLDSFSDIHRLLQCSNEEDDATSALAPPATLKSEPHVQSIQAVGDTAVFHEDYFVNEALQEHEFQGDDRCKGSPSRVQHELMINLEVANQLGYHQVDLHQNFDHNLFNGFNCTGQCGENAMRDSSGSLPSICPSPSAFFGPKCGLWDCLRSAQGLEWCQDYCSSFHAALALNEGPIGVTPVMQPGGIGLKDGLLFTALSAKTQRKNVGIPECEGVATTKSPWKACDLFNLSLFEGETIREWLFFDKPRRAFESGNRKQRSLPDYRGRGWHESRKQVMKEFGGLKRSYYMDPQPLNHFEWHLYEYEINNCDACALYRLELKLIDGKKSPKGKVTNDSLADPRKQMGRLTAEFPVTVDNKCSIDGRTKFNLKDDAGNVYSASNQMAPTNDSFGYGDYLVNEAPQEHKFQGIDLCNGLHSEVQHTLMNNLEVASQINYHPFDLHQNFDHNLFNGLNGAGHCGEDAIYHYSGLLPSISLRPSAILGPKCALWDCSRLAQESEWCLDYCDSFHADLALNEGQLSMTPVLRPGGIGLKDGPLFSALNAKSQGKDVGIPECRGAATTKSPWNAPELFNLSVLEGESIREWLFFDKPRRAFESGSRKQRSLPDYSGRGWHESRKQLMKEFGGLKRSYYMDPQPFNRFELHLYEYEINNCDACALYRLELKLIDGKKSPKGKVNNDPLADLQKQMGRLTAEFPVPVDNKRSVKGRQRLI*	788

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl02g00771	787	PANTHER	TRANSCRIPTION FACTOR VOZ1	1	470	IPR039277	GO:0006355\|GO:0048578

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl02g00771	Eupl-Chr2	9709261	9716686	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl02g00771	472	786	VOZ-9 Transcription Factor Family	AT1G28520	62.654	1.70e-132	401

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	VOZ	Eupl02g00771		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl02g00771	-		-	nnu:104599504	693.345