Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00766 ATGATGGGAGTAATCGACCTTAACAACACCGTCATCGATGACGAAGATGCTGAACCTGCAGCTGCTCTCGAAAGCGCTGCTGTATCGATTTCTTCGTCTTCGTCTTCTTCGGCGGTGTGTTTGGAGCTCTGGCATGCGTGTGCAGGCCCTCTCATTTCTCTGCCGAAGAAGGGGAGCATTGTTGTGTACTTTCCGCAAGGTCATTTAGAGCAGATTTCTGAATTCTCGGCATCCATGGTTTACGATCTCCCCCCTCATGTTTTCTGCCGTGTTGTCGACGTGAAGCTTCATGCTGAGGTGGCGACTGATGAGGTCTTCGCCCAGGTGTCTTTGGTTCCTGAAAGTGAGATTGAGCAGAAATTACAAGAAGAAGAGATTGAAGCAGGCGGTGAAGAAGAGGAAATTGAGGGTGTGAGCAAGTCGACTACGCCTCACATGTTCTGCAAGACTCTAACTGCTTCTGATACTAGCACCCATGGAGGGTTTTCTGTCCCTCGACGAGCTGCTGAAGACTGCTTCCCTGCTCTGGATTATAAACAGCAAAGACCTTCTCAAGAGCTTGCAGCAAAAGATTTACATGGTGTCGAATGGAGGTTTCGGCATATTTACAGGGGTCAGCCACGGAGGCATTTGCTCACGACTGGGTGGAGTGCCTTTGTTAATAAGAAGAAGCTTGTCTCTGGGGATGCCGTGCTCTTTCTTAGAGGTGATAATGGAGAATTGAGATTGGGAATTCGGAGGGCGGATCAAATTAAAAGTGGGGTTCCTTTTTCGGTCCTCTGTAGCCAGAGCTTTAACCTTAACACCTTCATTGCTGTGGCTAAGGCTGTATCAGCAAAGAGTGTATTCCACATTTGCTATAATCCAAGGGTGAGTCCATCGGCGTTTATAGTACCTTTTGGTAAATTCTCAAAGAGCTTTGATCATTCATTTTCCATTGGAACGAGGTTCAAAATGCGATTTGAAACTGAAGATGCAGCAGAGCGAAGATACACAGGGCAGGTAATTGGGGTTAGTGACATGGATCCTGTTAGATGGCCTGGTTCAAAATGGAGATGCCTATCGGTAAAGTGGGATGACGATGTCGAGATGAATCGACACAATAGGGTTTCTCCATGGGAGATTGAGCCGTCTGGTTCAGTTTCAGGCTCCAGCAGTTTGTTGGGACCTGGTTCAAAGAGAACCAGGATTAGTCTGTCTTCAACCAAATCGGATTTTCCGGTTCCTAATGGGGACAGGTTTTCAGACTTTGGGGAATCTTTAGGATTCCAGAAGGTCTTGCAAGGTCAAGAAATTTTTGGTTTTAACACTCCTTACAATGGTGTTGATGTGCCGAATCATCACCCATATGAATTAAGGAGACGCATACCTGGTTCGAACAGTTCTGGAATGGCTGCAATAGGAAGTGGCGTCAGAATCCCACCAGGAAATTCTGACATTTCCCACAAGCACATAGACTTTGGCGAATCTGTTCGGTTCCGTAAGGTCTTGCAAGGTCAAGAAATATTTCCAACACCACTGTATGGAAGAGCCCCAGTTGATAACCGGGCTCAGGATAATGGTGGGTATGGAATGTTTGACGGGGTTCACAAGTCTACCGTCAGAAGTGGATGGCATGCTACGATGCAGGGCTACACTGCTCATGTGCAACCATCTGCACCATCTGTACAAGTGTCTTCACCATCTTCTGTGCTTATGTTCCAACAAGCAAGTACTCAGGTTACATATCCTCGCTCTGCGTATTCCATCAATAATCGGGAGGGTGAGGAGGGTAACTACTTTGGTTTATTTGATGGTACTGATACATTGGGTGGGAAACTCACATCATCCTCAGCTTCTGGACGCCGGTATACCACTGAGGATTCACAAAGAATTTATTCCTCAGATCTTTTTAAAAAGCATAATCAACTTGGTTCTCTGTGTCCACATCCCGTCCTTGTAACTCAAACAGCTTTAAGGGGCAGTCAAGATTTGGTCCCTACCAGTAAAAGTGGTTGCAGACTCTTTGGTTTTTCCTTAACTGAGGGAAGCAATGTACCAAATGAAGAGGATACCATTACTACAATCACATCTCCATCCTCAACTGAGAACTTGAATCTGGACACACCTTTTTTACGCTCTGCTGAAGAGCAGTCGTATTTGAAGCCTTCTAGCTCGACCAAAACATATGAACGCAGTTGTACCAAAGTTCACAAGCAAGGGAGTGTTGTAGGCAGGGCGGTTGATCTCACAAAGCTTGATGGGTATGATGATCTGATATGTGAGTTGGAGCGGCTATTCAATATGGAGGGGCTTTTGAATGATCCCGATAAAGGATGGCATGTTTTATACACAGATAACGAGGATGATATGATGCTCGTTGGAGATGATCCATGGCAGGAATTCTGCAACATTGTTTCAAAAATTTTGATATACACTCACGACGAGGATGTAATTTTGGCATCTGAGGTGGCAGGCAACGATGCCCATAGTTGCTCAGGAGCGCATGGTGCCATTTGTATATCCAAGTTTTCGAGGGAATGCCATAATTCTTCTCCAACTGTAACTTGA 2550 0.4569 MMGVIDLNNTVIDDEDAEPAAALESAAVSISSSSSSSAVCLELWHACAGPLISLPKKGSIVVYFPQGHLEQISEFSASMVYDLPPHVFCRVVDVKLHAEVATDEVFAQVSLVPESEIEQKLQEEEIEAGGEEEEIEGVSKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPALDYKQQRPSQELAAKDLHGVEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDNGELRLGIRRADQIKSGVPFSVLCSQSFNLNTFIAVAKAVSAKSVFHICYNPRVSPSAFIVPFGKFSKSFDHSFSIGTRFKMRFETEDAAERRYTGQVIGVSDMDPVRWPGSKWRCLSVKWDDDVEMNRHNRVSPWEIEPSGSVSGSSSLLGPGSKRTRISLSSTKSDFPVPNGDRFSDFGESLGFQKVLQGQEIFGFNTPYNGVDVPNHHPYELRRRIPGSNSSGMAAIGSGVRIPPGNSDISHKHIDFGESVRFRKVLQGQEIFPTPLYGRAPVDNRAQDNGGYGMFDGVHKSTVRSGWHATMQGYTAHVQPSAPSVQVSSPSSVLMFQQASTQVTYPRSAYSINNREGEEGNYFGLFDGTDTLGGKLTSSSASGRRYTTEDSQRIYSSDLFKKHNQLGSLCPHPVLVTQTALRGSQDLVPTSKSGCRLFGFSLTEGSNVPNEEDTITTITSPSSTENLNLDTPFLRSAEEQSYLKPSSSTKTYERSCTKVHKQGSVVGRAVDLTKLDGYDDLICELERLFNMEGLLNDPDKGWHVLYTDNEDDMMLVGDDPWQEFCNIVSKILIYTHDEDVILASEVAGNDAHSCSGAHGAICISKFSRECHNSSPTVT* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00766 849 Gene3D - 310 385 - -
Eupl02g00766 849 ProSiteProfiles B3 DNA-binding domain profile. 147 249 IPR003340 GO:0003677
Eupl02g00766 849 Pfam Auxin response factor 274 354 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Eupl02g00766 849 Gene3D - 145 248 IPR015300 -
Eupl02g00766 849 Gene3D - 721 813 - -
Eupl02g00766 849 SMART B3_2 147 249 IPR003340 GO:0003677
Eupl02g00766 849 ProSiteProfiles PB1 domain profile. 725 809 IPR000270 GO:0005515
Eupl02g00766 849 SUPERFAMILY DNA-binding pseudobarrel domain 140 262 IPR015300 -
Eupl02g00766 849 CDD B3_DNA 145 247 IPR003340 GO:0003677
Eupl02g00766 849 Pfam AUX/IAA family 772 814 IPR033389 -
Eupl02g00766 849 Pfam B3 DNA binding domain 147 248 IPR003340 GO:0003677
Eupl02g00766 849 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 37 809 IPR044835 GO:0003677|GO:0006355|GO:0009725
Eupl02g00766 849 FunFam Auxin response factor 145 249 - -
Eupl02g00766 849 Coils Coil 114 134 - -
Eupl02g00766 849 MobiDBLite consensus disorder prediction 375 404 - -
Eupl02g00766 849 SUPERFAMILY CAD & PB1 domains 727 801 - -
Eupl02g00766 849 FunFam Auxin response factor 310 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00766 Eupl-Chr2 9610599 9622640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00766 35 825 B3 DNA Binding Superfamily AT5G60450 45.244 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Eupl02g00766 B3 1.2e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00766 K14486 - msin:131241117 1030.39