Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00753 ATGACTAGTGGCGGTGCGATCGCGATCGCTTATGACATTGTTTTGGCGCTTGTTTCATCTGTGCTCGTTGCACTAAGTATCGTTCTTATCGTAATTTGTAGGAAGAAGCCCGTCGAGTCGGAAGATAATCTCCCAGTCAAGCTTAGTGCCTGTCCGTATCCCTTAACTGATGTCGACGCCGCAACCGATGGATTCAATCATCGGCGGATTATCGGAAAGGGTCGGTTAGGAACTGTCTATGCAGCTGTCATAGCAAGTGGGGATGTAATTGCGGTAAAACGGATAAACCCAGTTCTTGTATTAAGCAATGCTGGTTTTGGGTTCTCGTTGGTAGTCAAGTCGCTCTCATTAGCCCATCACCCGCACGTCGTACCGATCATCGGGTTCTCAGAGGGTCCAGGAGAGAGAATTATCCTTATGGAGTTCATGGGCATGAAGAGCTTGGATTTCCACCTACACCAAAACTCCTTGGGTGCACCATTTCTGGACTGGGGACGCCGGTTGAGGTTAGCGGCTGGGGCTGCACGAGGTATTGAGTATTTGCATGAAGGCATGGCACCTTCTATAGTTCATGGGTGCATCAAACCATCAAACATCTTAATAGATGTGAACTTTTGTGCTAGAGTTTGTGATTATGGGCTTTCTTTCTTGGCACCCCAAGATCAGAGGAAAGGCCTTATGGGGTATGTTGATAAGGAATATAGGGTTGAGAAAGGGGGATTGTGCAAAGCAAGTGATGTTTATGCATTTGGGGTGGTTTTATTGGAGATTTTGAGTGGGAGAAGTTGTGAAGAAGGGTTGCTTGTTGAGTGGGCTTTGCCTTTGATAAGGGATATGAGGCTTGAAGAAGTTCTGGACCCTAGGATTCGAATTCCCTTAGATATAAAGCCTCTTGTTAGATTTGCTAAGGTTGCTTCAGCTTGTGGTATGTGGCAAAAGAAAGCACTCGGAGAATTGTGTGGTTGTCATCGAAATTTGGATCTAGAAGTGGAGGAAACAGGAGAGAGAGGTTCATTGTGGGATGGGAATAAGAGGAAGACAATGGAGATGACATGGTGCAATGGCTGTAACGATGAAAGAGCGACTGATGAAAGAAGCTCTCCATCGTCTACACCGGTAATTGATGAGAAATCAGAAGAAAGTCAGACTAAAAACTGCCCATCGTGTGGTCATTGGATCCAAGCCCAGGAACAGGCGGGAATTCATGATTTACCTGGGCTACCTGCTGGAGTTAAGTTTGATCCTACTGACCAAGAGATTCTTGAACATTTGGAGGGGAAGGTGAGGTCTGATATTCATAAACTTCACCCTCTCATTGATGAATTCATCCCTACGATCGACGGCGAGAACGGAATTTGTTACACTCACCCTGAGAAACTACCAGGAGTAAGCAAAGACGGCCTGATCCGCCACTTCTTTCATCGACCATCGAAGGCATACACAACAGGAACTAGGAAGCGGAGGAAGGTTCATACAGAAGCAGATGGAAGCGAGACTAGATGGCACAAAACAGGCAAAACCAGGCCAGTTTTTGTAAGTGGGAAAGTAAAAGGCTACAAGAAGATACTAGTGCTTTACACAAACTATGGCAAACAAAGAAAACCTGAGAAGACAAACTGGGTAATGCATCAATACCACCTTGGCAATAATGAAGAAGAGAAAGATGGAGAATTAGTGGTTTCAAAAGTGTTCTATCAGACACAGCCAAGACAATGTGGGTCAGGCATCAAGGAATCACTTCCTGCGAAATCGAACGGTCGAAATATACACGATGGTCATCCCACTACTCTCAAGGACACTGGCCTGATCGAATACTATAATCCCTCGATCATCTCCTATGATCAAGGTGGTCATCATAGAGCAAGCCCACCTCAGCTAATACCAAATTTCGTTGTTCATGCTGATGGGTCTTCATTTCTTCCTTGA 1926 0.4543 MTSGGAIAIAYDIVLALVSSVLVALSIVLIVICRKKPVESEDNLPVKLSACPYPLTDVDAATDGFNHRRIIGKGRLGTVYAAVIASGDVIAVKRINPVLVLSNAGFGFSLVVKSLSLAHHPHVVPIIGFSEGPGERIILMEFMGMKSLDFHLHQNSLGAPFLDWGRRLRLAAGAARGIEYLHEGMAPSIVHGCIKPSNILIDVNFCARVCDYGLSFLAPQDQRKGLMGYVDKEYRVEKGGLCKASDVYAFGVVLLEILSGRSCEEGLLVEWALPLIRDMRLEEVLDPRIRIPLDIKPLVRFAKVASACGMWQKKALGELCGCHRNLDLEVEETGERGSLWDGNKRKTMEMTWCNGCNDERATDERSSPSSTPVIDEKSEESQTKNCPSCGHWIQAQEQAGIHDLPGLPAGVKFDPTDQEILEHLEGKVRSDIHKLHPLIDEFIPTIDGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTEADGSETRWHKTGKTRPVFVSGKVKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFYQTQPRQCGSGIKESLPAKSNGRNIHDGHPTTLKDTGLIEYYNPSIISYDQGGHHRASPPQLIPNFVVHADGSSFLP* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00753 641 Pfam Protein kinase domain 66 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00753 641 MobiDBLite consensus disorder prediction 356 387 - -
Eupl02g00753 641 SUPERFAMILY NAC domain 402 566 IPR036093 GO:0003677|GO:0006355
Eupl02g00753 641 FunFam serine/threonine-protein kinase-like protein ACR4 32 142 - -
Eupl02g00753 641 Gene3D NAC domain 416 570 IPR036093 GO:0003677|GO:0006355
Eupl02g00753 641 ProSiteProfiles Protein kinase domain profile. 65 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00753 641 Gene3D Transferase(Phosphotransferase) domain 1 143 319 - -
Eupl02g00753 641 ProSiteProfiles NAC domain profile. 407 566 IPR003441 GO:0003677|GO:0006355
Eupl02g00753 641 FunFam NAC domain-containing protein 73 416 570 - -
Eupl02g00753 641 Gene3D Phosphorylase Kinase; domain 1 31 142 - -
Eupl02g00753 641 MobiDBLite consensus disorder prediction 575 594 - -
Eupl02g00753 641 SUPERFAMILY Protein kinase-like (PK-like) 43 302 IPR011009 -
Eupl02g00753 641 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 376 579 IPR044799 GO:0003700
Eupl02g00753 641 Pfam No apical meristem (NAM) protein 408 547 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00753 Eupl-Chr2 9388619 9401446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00753 350 641 NAC Transcription Factor Family AT4G28500 62.264 3.30e-122 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Eupl02g00753 Pkinase 3e-22 CL0016
TF NAC Eupl02g00753 Pkinase 3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00753 - - ming:122059358 497.278