Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00748 ATGCTCAGCTCATTTAGTACTTCTCATAAAGAAGAAGATCAGGACCCATCAGATCACCACCACCACCATAGTAAAAAACTGACCCACATGCGCCAATTACTAATAAGCTGCGCCGAGCTCGTCTCTCAGTCTGACTTCACTGCTGCCCACCGCCTCCTTTCCCTCCTCTCCACCACTTGTTCTGTCCATGGTGATTCCACAGAAAGATTGGTACATCACTTTTCCAGAGCACTCTCCTTCAGGCTCAATCGCTACACCATGATCCCTTCAACAGCTGCTACAGCTTCTCAACCCATCATAACAGGTGGCGCCACCGAACTCGAGGCTCTTCAATCCACCTATCTCTCACTCAACCAAGTCGCTCCATTTATAAGATTCAGTCATCTCACAGCCAACCAAGCCATCTTAGAAGCCATTGAAGGCCAACAGATGATTCACATCCTTGACTTCGACACCATGCAAGGAGTGCAATGGCCTCCTCTGATGCAAGCCATTGCTGAGCGTTCAGACCCATCAAACCCTCCGATGATCCGAATTACAGGAACAGGTCAGGACTTGGAAACTCTTCAAAGAACCGGCGATCGTCTCCAGAAATTCGCTGAATCTCTAGGTCTTAAATTCCAATTCCATCCGCTTCTTCTCCTCGATGACCCTCCTTCTGTAGCTCTTCATCTTCCCTCCGCTGTTGTTCTCCTTCCCGGTGAGACGCTTGCCGTGAATTGTGTGTTTTACCTGCACAGACTACTCAGAGATGACTCTCGAGACGTCCGGCTCTTCCTCCGCACCATTAAAGCTATGAACCCTAAGGTTGTGACCGTCGCTGAGAGAGAAGCTAATCACAATCACCCGATTTTCATGCAGAGATTCGTGGAGGCTTTGGATCATTACACAGCTTTGTTTGATTCACTGGAAGCTACGTTGCCGCCTAACAGTCGAGAGAGGCTCGACGTTGAGCAGGTCTGGTTTGGGAAGGAGATCATTGATATTGTGTCTGAGGAGGGAGACGAGAGGAGAGAACGGCATGAGAGGTTCGAGAGTTGGGTGGAGAAGTTGTCGAGCTCAGGCTTTTCGAATGTTCCATTGAGCCCTTTTGCTTTGTCGCAGGCGAAGCTTCTTCTCAGGCTTCACTATCCCTCTGAAGGGTATCAGCTTCAGATTCTCAACGACTCTTTCTTTCTAGGTTGGCAAAATCAAGCCCTCTTCTCAGTCTCTTCATGGCACTAA 1224 0.4902 MLSSFSTSHKEEDQDPSDHHHHHSKKLTHMRQLLISCAELVSQSDFTAAHRLLSLLSTTCSVHGDSTERLVHHFSRALSFRLNRYTMIPSTAATASQPIITGGATELEALQSTYLSLNQVAPFIRFSHLTANQAILEAIEGQQMIHILDFDTMQGVQWPPLMQAIAERSDPSNPPMIRITGTGQDLETLQRTGDRLQKFAESLGLKFQFHPLLLLDDPPSVALHLPSAVVLLPGETLAVNCVFYLHRLLRDDSRDVRLFLRTIKAMNPKVVTVAEREANHNHPIFMQRFVEALDHYTALFDSLEATLPPNSRERLDVEQVWFGKEIIDIVSEEGDERRERHERFESWVEKLSSSGFSNVPLSPFALSQAKLLLRLHYPSEGYQLQILNDSFFLGWQNQALFSVSSWH* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00748 407 MobiDBLite consensus disorder prediction 1 25 - -
Eupl02g00748 407 Pfam GRAS domain family 30 406 IPR005202 -
Eupl02g00748 407 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 29 403 IPR005202 -
Eupl02g00748 407 ProSiteProfiles GRAS family profile. 21 407 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00748 Eupl-Chr2 9299773 9300996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00748 29 406 GRAS Transcription Factor Family AT1G55580 54.815 6.70e-140 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl02g00748 GRAS 2.9e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00748 - - nnu:104594324 597.816