Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00734 ATGGATGATCAGAAGAACCAGTTTGAGTTTTTGCAAAATCATGTATCCTTGCAAGAACAAGAAACAATGACTAGATCAGGTTCATCAGAGAGATGGGTATCTGTGGAGGGGAATCAGACGAAGAAGGGACTACTAAGGATCAAGCTCAAGGTTCCAAAGGCTAATGAATGCAGTAGAGAAGAGTTTGTATACCATCATAGTCTTCCTGAAAAGAAATTTCGAGTCTGCAAGGTCTGTAACAAGAATTTTAGTTCCAGAAGAGCTCTTGGAGGTCATATGAGAGTTCATGTTCAGGTTGAAGAAGATGGTTTTTCTTCGAAGAAGAATCGGAATTCGAAGCTCAAGATTCATCGTAGGAAGCTCAAGAGTCACCTTGTCAATCTTTCAGTAAGAGGGAACAGTGATCATAGTAACAATGTAAGTGATGAATCCATTGAAGGCAGTCCAAAGACTAACAATAACATTACTTGTTCAGTCTGTGGAAAGACCTTCCCTTCCATGAAGTCGTTGTTTGGTCACATGAGATGCCATCCTGAAAGGGAATGGAGGGGAATTCAACCTCCCCGGACGGCGAAAAACAGCTCTTCGTCGACTGTTTCAGACTCTATAAGCCAGAAGATGGATGATCAGATTGATTCTGCTACGACGATTGGAGGGTCAGCTTTCGATCTAGTACAGTCTCTCCCTAGCTGGTCCGTGACTGCGAAAAGACGCCAGAAAAGTATAGCCTCTGTTAATTCAGAGGAGCAGATACCTGATGCTGCCTATGATCTCATGATGCTAGCTCAAGGAGATTCTCTAGATTCAGGCTTGTCAAACAAGCGAAGAAGCGAAGAACCAGACGGAATTGAGGACACTGACCATGTTTCAGAAAATTTAGACCTGTCGAAGAAGCGGAGATGCGAGGAATCAGAAGCTGGAAACAGAGATTTTCAATCTAAGAAGCTAAAAATTGATGGAGGGTCGTTGAAGCTGAGAAACGAGGAATCAGAAGCTGGACACATCGATTTTCTGTCGAAGGAAGTGAAAACAGACAAATGGAAGGGTAATTCTAGAGCCGGGTTTGATTCAGAATTGGTGAACATGGACTCTGGATGGGAGTACTCAGACGGGTTGGGAGAAGATTCAGAGCAAAACAGCAAGGAGGAATCGGAGAGCAAGTACACAGATTACAACATATCAAGAAATCAAATCACTTTCACGTCTGAGATCAAGAAGAAGAAGAAGAAAATTAAGTTTCGAGACTTAGAAATGGTTCGAGACGTCGGTGTGATTGATTACAAGCAGACACCAATTACCCCTAATAGATTCAAATGCACCTCTTGCAATAAGTCCTTCCCTTCTCACCAAGCTTTGGGTGGTCATAGATCCAGTCATAAGAAAGGCAAGAACCGTCTCCACACAACAGATATGGAAGGATTTGAATTAGCAGATGCCTCAGCCGAGAAGGGAAGATATGATGTTGTCACCGATCAGACCCAACTCGACGACTTGCAGAAATTCGACGACACCAGGTCTAAAGTGGTGAGTAAACATCAGTGCAAGATTTGCAACAAGACATTTCCGACGGGTCAGGCTCTTGGGGGTCACAAGAGGTGTCACAGGGCTAGCCCAATCGAAGCGCCAACATTGCCAGAAGAAGTCAGTAAAACAGGTCGAAGGCTATTGGATTTTGACCTCAATGAGCTCCCCTTGATTGAAGATCATGAAGAAAGTCTTGAGTCTGCTTCTATTCATTCTATAGGAATTAAGCAGCCAGTTGATTATGCATCTACCTCTAACAATTCAGTTAGTTAG 1797 0.4329 MDDQKNQFEFLQNHVSLQEQETMTRSGSSERWVSVEGNQTKKGLLRIKLKVPKANECSREEFVYHHSLPEKKFRVCKVCNKNFSSRRALGGHMRVHVQVEEDGFSSKKNRNSKLKIHRRKLKSHLVNLSVRGNSDHSNNVSDESIEGSPKTNNNITCSVCGKTFPSMKSLFGHMRCHPEREWRGIQPPRTAKNSSSSTVSDSISQKMDDQIDSATTIGGSAFDLVQSLPSWSVTAKRRQKSIASVNSEEQIPDAAYDLMMLAQGDSLDSGLSNKRRSEEPDGIEDTDHVSENLDLSKKRRCEESEAGNRDFQSKKLKIDGGSLKLRNEESEAGHIDFLSKEVKTDKWKGNSRAGFDSELVNMDSGWEYSDGLGEDSEQNSKEESESKYTDYNISRNQITFTSEIKKKKKKIKFRDLEMVRDVGVIDYKQTPITPNRFKCTSCNKSFPSHQALGGHRSSHKKGKNRLHTTDMEGFELADASAEKGRYDVVTDQTQLDDLQKFDDTRSKVVSKHQCKICNKTFPTGQALGGHKRCHRASPIEAPTLPEEVSKTGRRLLDFDLNELPLIEDHEESLESASIHSIGIKQPVDYASTSNNSVS* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00734 598 MobiDBLite consensus disorder prediction 130 149 - -
Eupl02g00734 598 SUPERFAMILY beta-beta-alpha zinc fingers 73 177 IPR036236 -
Eupl02g00734 598 ProSitePatterns Zinc finger C2H2 type domain signature. 514 534 IPR013087 -
Eupl02g00734 598 Pfam C2H2-type zinc finger 512 536 - -
Eupl02g00734 598 Pfam C2H2-type zinc finger 157 179 - -
Eupl02g00734 598 Pfam C2H2-type zinc finger 436 461 - -
Eupl02g00734 598 Pfam C2H2-type zinc finger 75 96 - -
Eupl02g00734 598 Gene3D Classic Zinc Finger 75 177 - -
Eupl02g00734 598 SUPERFAMILY beta-beta-alpha zinc fingers 436 534 IPR036236 -
Eupl02g00734 598 Coils Coil 1 21 - -
Eupl02g00734 598 ProSitePatterns Zinc finger C2H2 type domain signature. 76 96 IPR013087 -
Eupl02g00734 598 ProSiteProfiles Zinc finger C2H2 type domain profile. 512 539 IPR013087 -
Eupl02g00734 598 ProSiteProfiles Zinc finger C2H2 type domain profile. 437 464 IPR013087 -
Eupl02g00734 598 ProSitePatterns Zinc finger C2H2 type domain signature. 439 459 IPR013087 -
Eupl02g00734 598 ProSitePatterns Zinc finger C2H2 type domain signature. 157 177 IPR013087 -
Eupl02g00734 598 SMART c2h2final6 74 96 IPR013087 -
Eupl02g00734 598 SMART c2h2final6 512 534 IPR013087 -
Eupl02g00734 598 SMART c2h2final6 155 177 IPR013087 -
Eupl02g00734 598 SMART c2h2final6 437 459 IPR013087 -
Eupl02g00734 598 ProSiteProfiles Zinc finger C2H2 type domain profile. 74 101 IPR013087 -
Eupl02g00734 598 MobiDBLite consensus disorder prediction 267 290 - -
Eupl02g00734 598 MobiDBLite consensus disorder prediction 366 388 - -
Eupl02g00734 598 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 104 210 IPR044653 GO:0003700
Eupl02g00734 598 Gene3D Classic Zinc Finger 434 534 - -
Eupl02g00734 598 MobiDBLite consensus disorder prediction 188 205 - -
Eupl02g00734 598 MobiDBLite consensus disorder prediction 374 388 - -
Eupl02g00734 598 ProSiteProfiles Zinc finger C2H2 type domain profile. 155 182 IPR013087 -
Eupl02g00734 598 MobiDBLite consensus disorder prediction 271 290 - -
Eupl02g00734 598 MobiDBLite consensus disorder prediction 179 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00734 Eupl-Chr2 9080820 9082824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00734 418 584 C2H2 Transcription Factor Family AT2G37430 32.955 1.94e-18 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Eupl02g00734 zf-C2H2_6 5.4e-12 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00734 - - nnu:104594341 374.785