Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00720 ATGTATCGACCGAAGACTGTCCCTAGTTCAAGTTTAGTTTGCAGCAACTCATTAGTTCATGGCCAGCACTTAGATGGCAGTGCCAACGAAATGAACTCAAGCAGCGGAGGGAACAATCCCAACAATCCTAGTTTGTCGTCAAAGCACCGGTTGCGTTGGACACACGAGCTCCACGAACGTTTTGTGGATGCTGTGGCGCAACTTGGTGGGCCAGATAGAGCAACTCCTAAAGGCGTCCTTAGAGTTATGGGTGTACAAGGTTTGACCATCTACCATGTCAAAAGCCACTTACAGAAATATCGGCTTGCGAAGTACCTCCCGGAAACTACATCAGATGGGAAAAAGGCTGATAAAAGAGAATCAGGGGACTTGTTTTCCAGCTTGGATGGTTCATCTGGGATGCAAATAACAGAAGCACTCAAGCTGCAAATGGAGGTGCAAAAGCGGCTGCATGAACAATTGGAGGTCCAGAGGCAGCTACAGTTACGGATAGAAGCCCAAGGAAAGTACCTGAAGAAGATCATCGAAGAGCAGCAACGGCTCAGTGGCGTTCTTGCCGTAGGACCTGGTTCAGGGATCCTTGCCCCCACCTCAGGTGACAACTGCCCGGAATCTTCCGACAAGACTGACCCATCAACCCCTGCTCCAACCTCCGAGTCCCCCCTCCAAGACAAGGCTGCTAAGGAATGTGTCCCAGCCAAGAGTCTCTCCCATAACGAGTCTTGCTCGTCCCGCCATGAACCTCTGACTCCAGATTCTGGCTGCATTGTTGGTTACCCAGATGAGACCCCAAAAGAGGAAAATTCGGTCAAGAAGCAGCGGGTGAGCATGGATCCCAAACATGCAGAAGTGGAGATGATGCTCACACACCAGATACTAGAGTCTAGTTTGGGCTCAGGTTTCCAGCAGCAATGCTCAGTTTTCCCCATTGGGGAGCATTTTGATCCCTCTGCAGGGACTCCCCTCAGTGACAAAGATATGCCTGAAAATGCTTCGGGCAACGATCTATGA 1011 0.5045 MYRPKTVPSSSLVCSNSLVHGQHLDGSANEMNSSSGGNNPNNPSLSSKHRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPETTSDGKKADKRESGDLFSSLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLAVGPGSGILAPTSGDNCPESSDKTDPSTPAPTSESPLQDKAAKECVPAKSLSHNESCSSRHEPLTPDSGCIVGYPDETPKEENSVKKQRVSMDPKHAEVEMMLTHQILESSLGSGFQQQCSVFPIGEHFDPSAGTPLSDKDMPENASGNDL* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00720 336 MobiDBLite consensus disorder prediction 109 130 - -
Eupl02g00720 336 NCBIfam myb-like DNA-binding domain, SHAQKYF class 48 103 IPR006447 GO:0003677
Eupl02g00720 336 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 45 105 IPR017930 -
Eupl02g00720 336 FunFam Myb family transcription factor 47 105 - -
Eupl02g00720 336 Coils Coil 137 157 - -
Eupl02g00720 336 Pfam MYB-CC type transfactor, LHEQLE motif 134 180 IPR025756 -
Eupl02g00720 336 MobiDBLite consensus disorder prediction 312 336 - -
Eupl02g00720 336 MobiDBLite consensus disorder prediction 198 220 - -
Eupl02g00720 336 MobiDBLite consensus disorder prediction 23 47 - -
Eupl02g00720 336 MobiDBLite consensus disorder prediction 195 255 - -
Eupl02g00720 336 SUPERFAMILY Homeodomain-like 46 102 IPR009057 -
Eupl02g00720 336 MobiDBLite consensus disorder prediction 109 124 - -
Eupl02g00720 336 Pfam Myb-like DNA-binding domain 51 101 IPR001005 -
Eupl02g00720 336 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 29 311 IPR044848 GO:0003700
Eupl02g00720 336 Gene3D - 47 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00720 Eupl-Chr2 8875710 8879368 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00720 83 336 G2-like Transcription Factor Family AT2G01060 62.205 2.06e-96 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl02g00720 Myb_DNA-binding 2.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00720 - - pvy:116125265 453.366