Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00718 ATGTTCTCTGGTTTGATTCAACCCCACGAATCTGTTATTCGCCAGGAAGAGATTCAGGGCTCGAATCCTTCCCTGGTTCTCACTTCAGATCCCAAACCTCGTCTTCGATGGACTGCAGACCTGCACGAACGATTCGTTGATGCTGTGACTCAGCTCGGAGGAGCCGATAAAGCGACACCAAAGTCTATCATGCGAACGATGGGTGTGAAAGGACTTACTCTATTCCACTTAAAGAGTCACCTTCAGAAATACAGACTAGGTAAGCAATCAGGGAAAGACTTGACTGAGGCTACCAAAGATGGAACAACAGCTTCATACCTTTTGGATAGCCCAAACACTGGTACTTCATCTCCAGGCTTGCCGACTTCCGATATGAATGAGGGCTATGAGGTCAAGGAGGCACTGAGAGCCCAAATGGAAATGCAGAGAAAACTACATCTACAAGTTGAAGTTGAGAACCACGTACAGATTCGGAAGGATGCGGAACGAAGATATGTGGAATCCATGCTCGAGAGAGCATGTAAGATGCTTGCTAATCAAACCATAGGTGGTGTTGCAAAAACCGAGGGCCAAGACCTTCCGGCACTGACAACGAAGGTATCAGTGACAGGCTCCTCCAGCAACCTTCTGAGCTTCTATTCTTTACATCCAGCTGAAGCAGTCAGAGTGCACATCCCTGAAGAGGAGCCTCCTAGTTTGCAGCCCCCTGATTGTTCCACTGAAAGCTGCCTGACTTCACACGGTAGTGCAGCAACATTGTCTTTGGAGACTTCTCCTGCAGGATGCAAGAAAAGGGTGCGGAAGTTGGACTCCACAACAGATTCTCTGATTTGGGGTGAGGCCGAAACCAGAGCCGAAGACATTGATGTGGGTCGCATCAACCCCCACTGGATCACTGGGTACGGTAGATTCAAAGAAATTTGA 924 0.4848 MFSGLIQPHESVIRQEEIQGSNPSLVLTSDPKPRLRWTADLHERFVDAVTQLGGADKATPKSIMRTMGVKGLTLFHLKSHLQKYRLGKQSGKDLTEATKDGTTASYLLDSPNTGTSSPGLPTSDMNEGYEVKEALRAQMEMQRKLHLQVEVENHVQIRKDAERRYVESMLERACKMLANQTIGGVAKTEGQDLPALTTKVSVTGSSSNLLSFYSLHPAEAVRVHIPEEEPPSLQPPDCSTESCLTSHGSAATLSLETSPAGCKKRVRKLDSTTDSLIWGEAETRAEDIDVGRINPHWITGYGRFKEI* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00718 307 Gene3D - 31 89 - -
Eupl02g00718 307 Pfam Myb-like DNA-binding domain 35 85 IPR001005 -
Eupl02g00718 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 89 IPR017930 -
Eupl02g00718 307 MobiDBLite consensus disorder prediction 102 125 - -
Eupl02g00718 307 NCBIfam myb-like DNA-binding domain, SHAQKYF class 32 87 IPR006447 GO:0003677
Eupl02g00718 307 Pfam MYB-CC type transfactor, LHEQLE motif 130 176 IPR025756 -
Eupl02g00718 307 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 14 253 IPR044848 GO:0003700
Eupl02g00718 307 MobiDBLite consensus disorder prediction 102 123 - -
Eupl02g00718 307 FunFam Myb family transcription factor 31 89 - -
Eupl02g00718 307 SUPERFAMILY Homeodomain-like 32 88 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00718 Eupl-Chr2 8867109 8871132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00718 22 279 G2-like Transcription Factor Family AT4G13640 45.660 5.78e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl02g00718 Myb_DNA-binding 5.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00718 - - nnu:104594360 468.388