Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00706 ATGGATAACAAGTCACAGATGGTTGGTGTTCACTCTAATATTGAAATGGGATCACTAGATGAAGTATCGGTACTTGAGTTTGAGGACGAGAGCCTCGTTAGCCCTGTGGCAGTTACTAGAAAGACACATTCTCTGGATGCATCTCAGCACGGATCATTTTCAGGTTCTCCACGAGTTTGCAGTATTAAATATATGAGGAATAGAATGTTCAGGAGCCTAAAGATTGTAGTCTTTTCGACCAAAATGAACTTGCTTATGCCTTTTGGCCCTCTAGCAATCCTGGTCCATAATCTGACTGGTCATAATGGATGGGTGTTCTTTCTATGCTTATTGGGTATAACACCTTTGGCTGAGCGTTTGGGTTTTGCTACAGAGCAGCTAGCGTTCTTCACTGGAGCTACAGTTGGGGGTCTTCTAAATGCTACTTTTGGAAATGCAACCGAATTGATAATATCAATTTATGCGCTGAAACATGGAATGATACGTGTTGTTCAGCAGTCATTATTAGGCTCAATTTTGTCGAACATGTTGCTGGTTCTTGGATGTGCATTCTTCAGTGGTGGGATTGTTTTTTATAAGAAGGAACAGGTTTTTAACAAGGCAGCTGCTGTAGTGAACTCAGGATTGCTGTTGATGGCTGTTATGGGCCTACTCTTTCCAGCTGTACTCCACTTCACACACACTGAGGTGCATTTTGGGAAATCAGAGTTGGCCCTTTCAAGGTTTAGCAGCTGTATTATGCTTGTGGCATATGCTGCCTATCTTGTTTTTCAGCTGAAAAGTCACAAGAATTTATACATCCCTGTCAATGAGGGAGGAAGTCCGACTGAAGGGAGCTCAGATGATGATGAAGTTCCTGAGATCTCTAAATGGGAATCAATAATATGGCTTGCAATTTTGACTGCTTGGATTTCAATCCTCTCCGAGTACCTAGTTGATGCCATACAGGGAGCATCTGTGGCATGGAAAATGCCAGTTGCATTTATTAGCGTTATCTTACTTCCAATTGTAGGGAATGCTGCAGAGCATGCAAGTGCTATTATGTTTGCCATGAAAGATAAGCTTGACATTTCTTTGGGAGTTGCAATAGGTTCTTCGACACAGATATCCATGTTTGGGATTCCCTTTTGCGTCGTTGTTGGCTGGATCATGGGGCGCCCAATGGACTTGAATTTTCAACTTTTCGAGACAGCCACACTTTTTATAACAGTTTTAGTTGTAGCATTCTTGCTGCAGGATGGAACTTCTAACTACTTTAAAGGACTAATGCTCATTCTTTGCTATCTGATAGTAGCTGCAAGTTTCTTTGTACATGTAGATCCTACTTCAGTTGAGGATAAGCCTTCCAAAACTTAA 1356 0.4167 MDNKSQMVGVHSNIEMGSLDEVSVLEFEDESLVSPVAVTRKTHSLDASQHGSFSGSPRVCSIKYMRNRMFRSLKIVVFSTKMNLLMPFGPLAILVHNLTGHNGWVFFLCLLGITPLAERLGFATEQLAFFTGATVGGLLNATFGNATELIISIYALKHGMIRVVQQSLLGSILSNMLLVLGCAFFSGGIVFYKKEQVFNKAAAVVNSGLLLMAVMGLLFPAVLHFTHTEVHFGKSELALSRFSSCIMLVAYAAYLVFQLKSHKNLYIPVNEGGSPTEGSSDDDEVPEISKWESIIWLAILTAWISILSEYLVDAIQGASVAWKMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVVGWIMGRPMDLNFQLFETATLFITVLVVAFLLQDGTSNYFKGLMLILCYLIVAASFFVHVDPTSVEDKPSKT* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00706 451 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 42 441 IPR004713 GO:0006812|GO:0008324|GO:0016020
Eupl02g00706 451 FunFam Vacuolar cation/proton exchanger 281 437 - -
Eupl02g00706 451 Pfam Sodium/calcium exchanger protein 104 259 IPR004837 GO:0016020|GO:0055085
Eupl02g00706 451 Pfam Sodium/calcium exchanger protein 294 433 IPR004837 GO:0016020|GO:0055085
Eupl02g00706 451 Gene3D - 131 276 IPR044880 -
Eupl02g00706 451 Gene3D - 279 437 IPR044880 -
Eupl02g00706 451 FunFam Vacuolar cation/proton exchanger 133 272 - -
Eupl02g00706 451 NCBIfam calcium/proton exchanger 71 436 - -
Eupl02g00706 451 NCBIfam calcium/proton exchanger 86 436 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00706 Eupl-Chr2 8605230 8614813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00706 10 441 Antiporters AT1G55730 72.917 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00706 K07300 - ming:122067513 744.191