Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00652 ATGGAGCAGCAGCAGCACGAAGACACTTACTCCGATTCATACTCCTCAACCTTATTCAGATTCTTCCGTTGGGACGTCTTTCTCAGTTTCAGAGGCGAAGACATTCGCCACAATTTCACCGACCGTCTATACACCGAACTCGTACGTAACGGCATACGTACGTTCCGTGTCGACGAGGACGAGATAGGAGACGAGATCTCTCCTTCTCTATTAACGGCGATCGAAGACTCCGCAGCCTTCATCGCCGTTATCTCGGAGAACTACGCATCTTCTAGGTGTTGCCTTGAAGAGCTGACCAAGATCTTGGATTGCCGACGATTGATTCTTCCAGTGTTCTACCAAGTCGATCCCTCTCACGTTCGTCGCCAGAATGGCCCCTTCGAAGAGGCCTTTCGGGTCCATGAGCAACGTCTCATCGGACAAGACTTGGAGAAGGTTCTGAGATGGAGGAAAGCGATGGCAAAAGCTGGAGGGATTTCCGGTTGGGATTCCAGGAATTTGAAAGAGACACAGTTAATACAATCTTTAGTTGAACATATTAGGATTAAATTAAGTAATATTCCCTTAGGTGTGGCTAAACATCCAATTGGGGTCAATTCTCGTGTAGAAGAACTGATGAGGACATTAGATGTTAAATACAATGGTGTTCGAGTTGTTGGATTTCATGGGATGGGTGGGATTGGCAAGACAACCCTCGCTAAGGCTGTTTATAATAAAATTGGTGTTCAATTTGAACACTGCAGCTTCATTTCAAATATCAGAGAAACTTCAAGAAAGCGCAATGGTTTAATTTCCCTTCAAAACCAACTTATTCATGATCTTTTCCAAAAGAATGACTCACTTGTGGATGAGGTTAGTAGAGGTATCATTGTGATCAAAGAGAGAATTCATGAGAAGCGAGTTCTTGTTGTTCTCGATGATGTTGATGATGTAAGCCAACTTGATGCACTAGCTGGTAGGAGAGATTGGTTTTACAAAGGTAGTAGGATCATTATCACCACAAGAGATAACATAGTCTTACCGAAGTACCTTGTCGATGAAATCTATGAGGTGAAAGAGTTGAGTTCCATTGAGTCACTTCAACTCTTCAGTTATCATGCATTTGGAAGGGAGAAACCTATAGAAACTTTCATGCATCTCTCTAAACAAGTTGTGTCACTAACAGGAGGACTACCTTTGGCTCTAGAAGTACTTGGTGCTTTTTTGTTTGATAAGAGAAGAATAAAGGAGTGGGAAGATGGATTGGAAAAGTTGAAACGGATTCCTCCTGGTAGTCTTCATGAAATATTGAAGATAAGTTTTGATGGGCTGGATGAACAACAGAAGTGTATATTCCTCGACATTGCTTGTTTCTTTGTTAAACTGAAAATGAAGAGAGAAAATGCCATTGATATATTGAAGGGCTGTGGTTTCAATGCTGAGATAGAAATCTCAGTCCTTATGGGCAAATCACTTATTAAGATCATAGATGACAATGCCTTGTGGATGCATGATCAGCTTAGAGACATGGGAAGACAAATTGTTCGAGAAGAAAGCCTTGGAGATCCTGGCATGCGCAGTAGATTGTGGGATCATGATGAAATAATGTCTGTTTTGAGCGATGAAAAGGGAACAAGAAATATTCAAGGCATCATCCTCAACTTTGAAGAGAATAATGGGAAGAAGGTATTAAGATCTAAAGATGTCACCTCCACAATTACATGCTTGAAGGAAAAATTGAAGAATCCTTTTGATTTTGAAGCAAAGAAAGTGAAAGAAGTGAAACTGCTCACGAAACCATTTGCACCAATGGTTAATCTGAGATTGCTTCAAATCAATCATGTGAACTTGGAGGGAAAATTTAAACTTTTACCTGCTGAATTGAAATGGCTACAATGGAAAAGATGCCCTTTGGAAGCTCTTCCTTCTGATTTTTTCCCTCAGAAACTTGCTGTCCTTGATCTCTCAGAGAGCGGCATCAAACAAGTATGGGGCCAGAGATGGAGGGCCACATACAAGATGGCTGAGAAGTTGATGGTTATGGATCTTCATGGTTGCTATAATCTAACTGCCTCCCCTGATTTATCTGGGCACCCAAACTTGGAAAAACTGATTCTTGAGCGTTGTACAAGATTGATTAAGATTCACAAATCAATTGGGGATGTGAGAACATTACGTCTCTTGAACCTGAAAGACTGTTCAAACCTTATGGAATTTCCAAGCGACATTTCTGGATTGAAGCATCTTGAAAACCTTGTCCTCTCTGGTTGCTCCAAACTGAAAGAACTACCAAAGGACTTGGGTGGCATGGAGTCTTTGCGAGAGCTTCTTGTTGACGAAACTGCAATAGAGATGTTACCTGATTCTATTTTCCACCTTAATAAACTTGAAAGGTTTAGTCTTAATGGATGTGTGTCACTTAAACAACTACCTGGCTCCATAGGACAACTGGGTTCTCTGAGAGAGCTTTTTCTGAATGGTTCTGCTTTAGAAGAAATACCTGATTCCATTGGATCTTTGACAAACCTTGAAACACTGAGTTTAATGTGGTGTCAATCACTCATTGCAGTTCCTGATTCCATCGGCAATCTGGAATCATTAAAAAAACTTTTTCTTGATGTTAGTACAATCAAAGAACTGCCAACTTCCATTGGTTCAGTATCTCATCTGGAACAATTATCAGTTGGAAGATGTCGATTTCTTACCAAATTGCCTGTTTCCATTGGAGAATTAGAATCTATGGTTGAGCTTCAGTTAGACAGCACATCAATCACAGAATTACCAGATCATATTGGATCCTTGAACATGCTTGAGAAGCTTGAGATGAGGAATTGTGAATCTCTTACCTGTTTACCAGATTCAATTGGAAATATGTTGAATCTAACTACTTTGGTCATAGTTAAAGCCTTAATAACAGAGTTGCCAGAGTCTATAGGGCTATTGGAGAAACTTAGAATTTTGAGAATAAACCAATGTAAACAGCTCAGAACACTACCAGCTTCAATTGGAAAATTAAAGTGTCTGCGCCAATTTCATATGGCAGAAACTGGTGTGGCAGAATTACCTGAAGAATTTGGGATGCTTTCAAGCTTAGTGGTACTGAAAATGGCAAAACGTCTGGATCTTGGATGGCCCCAAAACATTGGAGAACATTTGGAGCTGACTGTTCCCAATGCACAAGAGAAACCTAAGCTGCTTGTTCTTCCAACTTCTTTCTCAAGTCTCTCCTTGTTACAGGAATTGGATGCTCGTTCTTGCAAAATATCCGGCATAATTTCTGATGATTTTGAGAAGTTGTCATCATTACAGATTCTGGAACTAGGCGACAATAATTTCTGCAGCCTTCCATCCAGCTTGAGAGGCCTTTCTATTCTGGAAAAGCTTTCCTTACCTTATTGCACAGAACTCAAATCTCTCCCTCCACTTCCCTCTAGTTTGACTTATGTGGATGTTACAAACTGTACTGCATTGGAAAGTATATCCGATCTGTCAAATTTGGAGAGTTTACAGGAGTTGCACATCATGAACTGCAAGAAAGTAATGGATATTCCTGGCCTTGAATGCTTGAAGTCCTTGACAAGCTTGTACATGAGTGGTTGCAATGCATGTTGTTCAGTCGTAAAGAGAAGACTTGTTAAGGTTGCTTTAAAGCGGTTACTCAATTTGAGCATTCCTGGTAGTGAAATCCCAAACTGGTTTGCTCAAGAAGTGTCGAGTTTTTCGAGCAGCAAAAACCGTAAAATCAAATCTGTGATTATATGTGTTGTTGTCTCTTTTGACCAACAGAAGCAGGATGGACTTAGAGATGAACTTCCTCTATATAATCAAAGCCTGGACATTCTAGCAACGATCGTAAGAGAGAACAGGCCAATATTCACTGCTGCATTGCCCTTGCTAGGAATTCCAAAAACCCATGAAGATCAAGTCTTGTTATGTCGATATCCAGATTATTCTCCGTTGTTGCTTCTGTTGAAGGATGGTGATAAGATACAGGTAACAATGCGAGACCCGCAAGCATTTCATGAAGTTCAACTGAAGAAGTATGGGATTCATTTGGTTTTCGAAGATGATGATGATGACGATGATGATGAAGAATCATTGGATGAAACCCAAAAATCTGTTTCGGAGAAACTGACAAATTTTTTCAGAGAAATCTAA 4137 0.4029 MEQQQHEDTYSDSYSSTLFRFFRWDVFLSFRGEDIRHNFTDRLYTELVRNGIRTFRVDEDEIGDEISPSLLTAIEDSAAFIAVISENYASSRCCLEELTKILDCRRLILPVFYQVDPSHVRRQNGPFEEAFRVHEQRLIGQDLEKVLRWRKAMAKAGGISGWDSRNLKETQLIQSLVEHIRIKLSNIPLGVAKHPIGVNSRVEELMRTLDVKYNGVRVVGFHGMGGIGKTTLAKAVYNKIGVQFEHCSFISNIRETSRKRNGLISLQNQLIHDLFQKNDSLVDEVSRGIIVIKERIHEKRVLVVLDDVDDVSQLDALAGRRDWFYKGSRIIITTRDNIVLPKYLVDEIYEVKELSSIESLQLFSYHAFGREKPIETFMHLSKQVVSLTGGLPLALEVLGAFLFDKRRIKEWEDGLEKLKRIPPGSLHEILKISFDGLDEQQKCIFLDIACFFVKLKMKRENAIDILKGCGFNAEIEISVLMGKSLIKIIDDNALWMHDQLRDMGRQIVREESLGDPGMRSRLWDHDEIMSVLSDEKGTRNIQGIILNFEENNGKKVLRSKDVTSTITCLKEKLKNPFDFEAKKVKEVKLLTKPFAPMVNLRLLQINHVNLEGKFKLLPAELKWLQWKRCPLEALPSDFFPQKLAVLDLSESGIKQVWGQRWRATYKMAEKLMVMDLHGCYNLTASPDLSGHPNLEKLILERCTRLIKIHKSIGDVRTLRLLNLKDCSNLMEFPSDISGLKHLENLVLSGCSKLKELPKDLGGMESLRELLVDETAIEMLPDSIFHLNKLERFSLNGCVSLKQLPGSIGQLGSLRELFLNGSALEEIPDSIGSLTNLETLSLMWCQSLIAVPDSIGNLESLKKLFLDVSTIKELPTSIGSVSHLEQLSVGRCRFLTKLPVSIGELESMVELQLDSTSITELPDHIGSLNMLEKLEMRNCESLTCLPDSIGNMLNLTTLVIVKALITELPESIGLLEKLRILRINQCKQLRTLPASIGKLKCLRQFHMAETGVAELPEEFGMLSSLVVLKMAKRLDLGWPQNIGEHLELTVPNAQEKPKLLVLPTSFSSLSLLQELDARSCKISGIISDDFEKLSSLQILELGDNNFCSLPSSLRGLSILEKLSLPYCTELKSLPPLPSSLTYVDVTNCTALESISDLSNLESLQELHIMNCKKVMDIPGLECLKSLTSLYMSGCNACCSVVKRRLVKVALKRLLNLSIPGSEIPNWFAQEVSSFSSSKNRKIKSVIICVVVSFDQQKQDGLRDELPLYNQSLDILATIVRENRPIFTAALPLLGIPKTHEDQVLLCRYPDYSPLLLLLKDGDKIQVTMRDPQAFHEVQLKKYGIHLVFEDDDDDDDDEESLDETQKSVSEKLTNFFREI* 1379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00652 1378 Gene3D Ribonuclease Inhibitor 560 801 IPR032675 -
Eupl02g00652 1378 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 448 IPR027417 -
Eupl02g00652 1378 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 186 - -
Eupl02g00652 1378 Gene3D Ribonuclease Inhibitor 1056 1251 IPR032675 -
Eupl02g00652 1378 PRINTS Disease resistance protein signature 218 233 - -
Eupl02g00652 1378 PRINTS Disease resistance protein signature 713 729 - -
Eupl02g00652 1378 PRINTS Disease resistance protein signature 388 402 - -
Eupl02g00652 1378 PRINTS Disease resistance protein signature 295 309 - -
Eupl02g00652 1378 SMART LRR_typ_2 857 880 IPR003591 -
Eupl02g00652 1378 SMART LRR_typ_2 904 927 IPR003591 -
Eupl02g00652 1378 SMART LRR_typ_2 810 833 IPR003591 -
Eupl02g00652 1378 SMART LRR_typ_2 763 786 IPR003591 -
Eupl02g00652 1378 SMART LRR_typ_2 974 998 IPR003591 -
Eupl02g00652 1378 SMART LRR_typ_2 1068 1091 IPR003591 -
Eupl02g00652 1378 SMART LRR_typ_2 1092 1115 IPR003591 -
Eupl02g00652 1378 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 162 IPR035897 -
Eupl02g00652 1378 Gene3D - 20 187 IPR035897 -
Eupl02g00652 1378 Gene3D - 353 438 IPR042197 -
Eupl02g00652 1378 Pfam TIR domain 24 183 IPR000157 GO:0007165
Eupl02g00652 1378 SMART till_3 23 159 IPR000157 GO:0007165
Eupl02g00652 1378 ProSiteProfiles TIR domain profile. 22 184 IPR000157 GO:0007165
Eupl02g00652 1378 SUPERFAMILY L domain-like 495 921 - -
Eupl02g00652 1378 Gene3D - 188 346 IPR027417 -
Eupl02g00652 1378 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 815 IPR044974 GO:0006952
Eupl02g00652 1378 Gene3D Ribonuclease Inhibitor 802 1055 IPR032675 -
Eupl02g00652 1378 SUPERFAMILY L domain-like 894 1219 - -
Eupl02g00652 1378 Pfam NB-ARC domain 201 421 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00652 Eupl-Chr2 7637235 7651001 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00652 24 886 WRKY Transcription Factor Family AT4G12020 30.795 6.38e-88 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00652 - - nnu:104593581 1563.13