Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00648 ATGCATCTCTCTAAACAAGTTGTGTCACTAACAGGAGGACTACCTTTGGCTCTAGAAGTACTTGGTGCTTTTTTGTTTGATAAGAGAAGAATAAAGGAGTGGGAAGATGGATTGGAAAAGTTGAAACGGATTCCTCCTGGTAGTCTTCATGAAATATTGAAGATAAGTTTTGATGGGCTGGATGAACAACAGAAGTGTATATTCCTCGACATTGCTTGTTTCTTTGTTAAACTGAAAATGAAGAGAGAAAATGCCATTGATATATTGAAGGGCTGTGGTTTCAATGCTGAGATAGAAATCTCAGTCCTTATGGGCAAATCACTTATTAAGATCATAGATGACAATGCCTTGTGGATGCATGATCAGCTTAGAGACATGGGAAGACAAATTGTTCGAGAAGAAAGCCTTGGAGATCCTGGCATGCGCAGTAGATTGTGGGATCATGATGAAATAATGTCTGTTTTGAGCGATGAAAAGGGAACAAGAAATATTCAAGGCATCATCCTCAACTTTGAAGAGAATAATGGGAAGAAGGTATTAAGATCTAAAGATGTCACCTCCACAATTACATGCTTGAAGGAAAAATTGAAGAATCCTTTTGATTTTGAAGCAAAGAAAGTGAAAGAAGTGAAACTGCTCACGAAACCATTTGCACCAATGGTTAATCTGAGATTGCTTCAAGTCAATCATGTGAACTTGGAGGGAAAATTTAAACTTTTACCTGCTGAATTGAAATGGCTACAATGGAAAAGATGCCCTTTGGAAGCTCTTCCTTCTGATTTTTTCCCTCAGAAACTTGCTGTCCTTGATCTCTCAGAGAGCGGCATCAAACAAGTATGGGGCCAGAGATGGAGGGCCACATACAAGATGGCTGAGAAGTTGATGGTTATGGATCTTCATGGTTGCTATAATCTAACTGCCTCCCCTGATTTATCTGGGCACCCAAACTTGGAAAAACTGATTCTTGAGCGTTGTACAAGATTGATTAAGATTCACAAATCGATTGGGGATGTGAGAACATTACGTCTCTTGAACCTGAAAGACTGTTCAAACCTTATGGAATTTCCAAGCGACATTTCTGGATTGAAGCGTCTTGAAAACCTTGTCCTCTCTGGTTGCTCCAAACTGAAAGAACTACCAAAGGACTTGGGTGGCATGGAGTCTTTGCGAGAGCTTCTTGTTGACGAAACTGCAATAGAGATGTTACCTGATTCTATTTTCCACCTTAATAAACTTGAAAGGTTTAGTCTTAATGGATGTGTGTCACTTAAACAACTACCTGGCTCCATAGGACAACTGGGTTCTCTGAGAGAGCTTTTTCTGAATGGTTCTGCTTTAGAAGAAATACCTGATTCCATTGGATCTTTGACAAACCTTGAAACACTGAGTTTAATGTGGTGTCAATCACTCATTGCAGTTCCTGATTCCATCGGCAATCTGGAATCATTAAAAAAACTTTTTCTTGATGTTAGTACAATCAAAGAACTGCCAACTTCCATTGGTTCAGTATCTCATCTGGAACAATTATCAGTTGGAAGATGTCGATTTCTTACCAAATTGCCTGTTTCCATTGGAGAATTAGAATCTATGGTTGAGCTTCAGTTAGACAGCACATCAATCACAGAATTACCAGATCATATTGGATCCTTGAACATGCTTGAGAAGCTTGAGATGAGGAATTGTGAATCTCTTACCTGTTTACCAGATTCAATTGGAAATATGTTGAATCTAACTACTTTGGTCATAGTTAAAGCCTTAATAACAGAGTTGCCAGAGTCTATAGGGCTATTGGAGAAACTTAGAATTTTGAGAATAAACCAATGTAAACAGCTCAGAACACTACCAGCTTCAATTGGAAAATTAAAGTGTCTGCGCCAATTTCATATGGCAGAAACTGGTGTGGCAGAATTACCTGAAGAATTTGGGATGCTTTCAAGCTTAGTGGTACTGAAAATGGCAAAACGTCTGGATCTTGGATGGCCCCAAAACATTGGAGAACATTTGGAGCTGACTGTTCCCAATGCACAAGAGAAACCTAAGCTGCTTGTTCTTCCAACTTCTTTCTCAAGTCTCTCCTTGTTACAGGAATTGGATGCTCGTTCTTGCAAAATATCCGGCATAATTTCTGATGATTTTGAGAAGTTGTCATCATTACAGATTCTGGAACTAGGTGACAATAATTTCTGCAGCCTCCCATCCAGCTTGAGAGGCCTTTCTATTCTGGAAAAGCTTTCCTTACCTTATTGCACAGAACTCAAATCTCTCCCTCCACTTCCCTCTAGTTTGACTTATGTGGATGTTACAAACTGTACTGCATTGGAAAGTATATCCGATCTGTCAAATTTGGAGAGTTTACAGGAGTTGCACATCATGAACTGCAAGAAAGTAATGGATATTCCTGGCCTTGAATGCTTGAAGTCCTTGACAAGCTTGTACATGAGTGGTTGCAATGCATGTTGTTCAGTCGTAAAGAGAAGACTTGTTAAGGTTGCTTTAAAGCGTTTACTCAATTTGAGCATTCCTGGTAGTGAAATCCCAAACTGGTTTGCTCAAGAAGTGTCGAGTTTTTCGAGCAGCAAAAACCGTAAAATCAAATCTGTGATTATATGTGTTGCTGTCTCTTTTGACCAACAGAAGCAGGATGGACTTAGAGATGAACTTCCTCTATATAATCAAAGCCTGGACATTCTAGCAACGATCGTAAGAGAGAACAGGCCAATATTCACTGCTGCATTGCCCTTGCTAGGAATTCCAAAAACCCATGAAGATCAAGTCTTGTTATGTCGATATCCAGATTATTCTCCGTTGTTGCTTCTGTTGAAGGATGGTGATAAGATACAGGTAACAATGCGAGACCCGCAAGCATTTCATGAAGTTCAACTGAAGAAGTATGGGATTCATTTGGTTTTCGAAGATGATGATGATGACGATGATGATGAAGAATCATTGGATGAAACCCAAAAATCTGTTTCGGAGAAACTGACAAATTTTTTCAGAGAAATCTAA 3006 0.3929 MHLSKQVVSLTGGLPLALEVLGAFLFDKRRIKEWEDGLEKLKRIPPGSLHEILKISFDGLDEQQKCIFLDIACFFVKLKMKRENAIDILKGCGFNAEIEISVLMGKSLIKIIDDNALWMHDQLRDMGRQIVREESLGDPGMRSRLWDHDEIMSVLSDEKGTRNIQGIILNFEENNGKKVLRSKDVTSTITCLKEKLKNPFDFEAKKVKEVKLLTKPFAPMVNLRLLQVNHVNLEGKFKLLPAELKWLQWKRCPLEALPSDFFPQKLAVLDLSESGIKQVWGQRWRATYKMAEKLMVMDLHGCYNLTASPDLSGHPNLEKLILERCTRLIKIHKSIGDVRTLRLLNLKDCSNLMEFPSDISGLKRLENLVLSGCSKLKELPKDLGGMESLRELLVDETAIEMLPDSIFHLNKLERFSLNGCVSLKQLPGSIGQLGSLRELFLNGSALEEIPDSIGSLTNLETLSLMWCQSLIAVPDSIGNLESLKKLFLDVSTIKELPTSIGSVSHLEQLSVGRCRFLTKLPVSIGELESMVELQLDSTSITELPDHIGSLNMLEKLEMRNCESLTCLPDSIGNMLNLTTLVIVKALITELPESIGLLEKLRILRINQCKQLRTLPASIGKLKCLRQFHMAETGVAELPEEFGMLSSLVVLKMAKRLDLGWPQNIGEHLELTVPNAQEKPKLLVLPTSFSSLSLLQELDARSCKISGIISDDFEKLSSLQILELGDNNFCSLPSSLRGLSILEKLSLPYCTELKSLPPLPSSLTYVDVTNCTALESISDLSNLESLQELHIMNCKKVMDIPGLECLKSLTSLYMSGCNACCSVVKRRLVKVALKRLLNLSIPGSEIPNWFAQEVSSFSSSKNRKIKSVIICVAVSFDQQKQDGLRDELPLYNQSLDILATIVRENRPIFTAALPLLGIPKTHEDQVLLCRYPDYSPLLLLLKDGDKIQVTMRDPQAFHEVQLKKYGIHLVFEDDDDDDDDEESLDETQKSVSEKLTNFFREI* 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00648 1001 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 71 IPR027417 -
Eupl02g00648 1001 PRINTS Disease resistance protein signature 336 352 - -
Eupl02g00648 1001 PRINTS Disease resistance protein signature 11 25 - -
Eupl02g00648 1001 Gene3D Ribonuclease Inhibitor 677 873 IPR032675 -
Eupl02g00648 1001 SUPERFAMILY L domain-like 118 561 - -
Eupl02g00648 1001 Gene3D - 1 61 IPR042197 -
Eupl02g00648 1001 SMART LRR_typ_2 527 550 IPR003591 -
Eupl02g00648 1001 SMART LRR_typ_2 691 714 IPR003591 -
Eupl02g00648 1001 SMART LRR_typ_2 715 738 IPR003591 -
Eupl02g00648 1001 SMART LRR_typ_2 386 409 IPR003591 -
Eupl02g00648 1001 SMART LRR_typ_2 480 503 IPR003591 -
Eupl02g00648 1001 SMART LRR_typ_2 597 621 IPR003591 -
Eupl02g00648 1001 SMART LRR_typ_2 433 456 IPR003591 -
Eupl02g00648 1001 Gene3D Ribonuclease Inhibitor 182 424 IPR032675 -
Eupl02g00648 1001 Gene3D Ribonuclease Inhibitor 425 562 IPR032675 -
Eupl02g00648 1001 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 435 624 IPR044974 GO:0006952
Eupl02g00648 1001 SUPERFAMILY L domain-like 517 842 - -
Eupl02g00648 1001 SUPERFAMILY "Winged helix" DNA-binding domain 49 155 IPR036390 -
Eupl02g00648 1001 Gene3D Ribonuclease Inhibitor 563 663 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00648 Eupl-Chr2 7572749 7581762 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00648 446 647 WRKY Transcription Factor Family AT4G12020 30.583 2.01e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00648 - - rvl:131310337 1160.98