Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00640 ATGGGTTCCAAAGATGTTGCAGATTTGATAGAGGCATCCTCGGGAGTTCATTTTTCAGGATTTCATTTGGATGGCTTGGAACCAAGAAATACAGAAGTGGAGCAACCAACAACCTCAGCAACCGGAAGTTTGCATAAGCAACCTTTCCTAATCGGAGTTGCCGGTGGTGCAGCGTCAGGGAAGACTACTGTCTGTGATATGATTATTGAGCAGCTTCGTGACCAGCGTGTTGTGCTTGTCAATCAGGATTCCTTTTATCACAATTTGACTGAAGACGAACTAATGCGAGTTCATGAATGCAACTTTGATCATCCTGTTCATAGTGTGGTGCAAAAGCATGTCAAAGATGCCTTTGACACTGAACAACTACTATCTTGTATGGAGAAGTTGAAGCATGGGCAGGCAGTTGATATTCCCAACTATGACTTCAGGAGTTACAAAAACAATATATTGCCAAAAAGAAGGGTCAATCCTTCGGATGTGATACTTTTGGAAGGGATACTACTTTTCCATGATCCTCGTGTCCGAGAAATGATGAACATGAAGATATTTGTTGATACAGATGCTGATGTACGCTTGGCAAGGAGGATAAGGCGTGATACAGTTGAGAAGGGTAGAGATCTTAGTAAAGTACTCGACCAGTACTCAAAATTCGTGAAGCCTGCTTTTGATGACTTTATTCTTCCAACCAAGAAGTTTGCAGATATTATTATTCCCCGTGGAGGAGATAATCATGTAGCTGTTGATTTGATTGTGCAACATATTCGCACAAAACTTGGCCAACATGATTTATGTAAAATATACCCTAATCTATATGTCATTCAATCGACTTTTCAGATACGAGGAATGCATACGCTAATACGTGATGCTAAAACAACAAAGCATGACTTTGTTTTTTATTCTGATCGATTGATTCGTTTGGTTGTTGAACATGGGCTGGGCCATCTTCCTTTTACAGAAAAGCAGGTGACCACTCCAACTGGATCTGTATATACTGGGGTCGATTTCTGTAAAAGGCTATGTGGCGTCTCTGTAATTAGAAGTGGTGAAAGTATGGAGAATGCACTGCGTGCATGTTGTAAAGGCATCAAGATTGGGAAGATTCTTATTCACAGGGAGGGCGATAACGGTCAGCAGCTAATCTATGAGAAACTGCCAAATGACATCTCAGATAGGCACGTGCTTCTTTTGGACCCTATCCTTGGAACAGGGAATTCGGCTGTTCAGGCTATATCTTTACTTATACGGAAGGGTGTACCAGAGTCCAACATCATATTTCTCAATCTCATATCTGCACCTCAAGGAGTGCATGTAGTCTGCAAAAGTTTCCCCAGACTTAAGATAGTGACTTCCGAAATTGATATTGGTTTGAATGAAGATTTCCGTGTCATTCCCGGCATGGGTGAATTTGGAGACCGATATTTTGGCACAGATGACGACGAGCAACAAGTGGTGGCTCAAGTGTAG 1467 0.4179 MGSKDVADLIEASSGVHFSGFHLDGLEPRNTEVEQPTTSATGSLHKQPFLIGVAGGAASGKTTVCDMIIEQLRDQRVVLVNQDSFYHNLTEDELMRVHECNFDHPVHSVVQKHVKDAFDTEQLLSCMEKLKHGQAVDIPNYDFRSYKNNILPKRRVNPSDVILLEGILLFHDPRVREMMNMKIFVDTDADVRLARRIRRDTVEKGRDLSKVLDQYSKFVKPAFDDFILPTKKFADIIIPRGGDNHVAVDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDAKTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVTTPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLIRKGVPESNIIFLNLISAPQGVHVVCKSFPRLKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTDDDEQQVVAQV* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00640 488 FunFam Uridine kinase 262 477 - -
Eupl02g00640 488 FunFam Uridine kinase 45 261 - -
Eupl02g00640 488 Pfam Uracil phosphoribosyltransferase 276 477 - -
Eupl02g00640 488 Pfam Phosphoribulokinase / Uridine kinase family 50 246 IPR006083 GO:0005524|GO:0016301
Eupl02g00640 488 CDD PRTases_typeI 335 450 IPR000836 -
Eupl02g00640 488 NCBIfam uridine kinase 47 258 IPR000764 -
Eupl02g00640 488 CDD UMPK 50 258 IPR000764 -
Eupl02g00640 488 Gene3D - 262 477 IPR029057 -
Eupl02g00640 488 PANTHER URIDINE KINASE 45 387 - -
Eupl02g00640 488 PRINTS Uridine kinase signature 226 239 - -
Eupl02g00640 488 PRINTS Uridine kinase signature 190 200 - -
Eupl02g00640 488 PRINTS Uridine kinase signature 204 215 - -
Eupl02g00640 488 PRINTS Uridine kinase signature 48 65 - -
Eupl02g00640 488 PRINTS Uridine kinase signature 133 148 - -
Eupl02g00640 488 Gene3D - 44 261 IPR027417 -
Eupl02g00640 488 SUPERFAMILY PRTase-like 261 478 IPR029057 -
Eupl02g00640 488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 251 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00640 Eupl-Chr2 7456638 7473014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00640 1 480 PRT Gene Family AT4G26510 82.025 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00640 K00876 - vvi:100259975 857.44