Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00625 ATGGGTCAGCTATGTGATTTCTGTGGGGAACATAGATCCATTGTATACTGCCGATCTGATGCTGCTTGCTTATGCTTGTCCTGTGATCGAAACGTCCATTCTGCAAATCCCCTTTCTAGGCGCCACTCAAGAACCCTTGTGTGTGAAAGATGCAATTCTCAGCCTGCCACGGTTAGGTGTGTTGAAGACAAGATCTCACTTTGTCAAAATTGTGACTGGACTGAGCATAGGGACTCTGCTGCATCTTTGGGACATAAGAGGCAGACAATCAACTGTTACTCAGGCTGTCCTTCAGCAGCGGAACTTTCTAGGATCTGGTCGTTTATTCTGGACTTCCCTTCTATGGATGCTTCTAAATGCGAGGAGGGAATGGGTTTAATGAGCATCGACGAGAACACTGTCAGTAACTCTTGGGGGCCTCCTGAAAAGAGCAGTACGGTAGACCTAACTGTTTCAGGGAGAATGAATGATGTGGAAAATGTCGATAAGTTTGGTATTTGGATGGGATCCTCTTCAGTGCCTGCAGTGCAATGCTGTGTAGATCAGCCGGCTGGATCCGTGGACTCAACCACGCCCAAGCTATGCTGTCCTGGAACAAAAAGCCTTGGACTCTGTGAAGATGATCTTTACGAAGATTTCAATGTGGATGATGTCGACTTGGATTTCGAGAACTATGAAGAACTTTTTGGTGTATCTCAGAATCATTTGGAACAGGGTTTTGGGGATAGTGTGATTGATAGCTTGTTTGGGGTGAAGGACATGTCTGTTGCTGATTCCAATTGTCAGGACGAATTTGTCGCTGAGGTTTTTTCCATAACTTATTCTTCTCTTGCATCTGGTACCCCATCCTTCATCTACAATTATTTTTTCTTCTGA 876 0.4498 MGQLCDFCGEHRSIVYCRSDAACLCLSCDRNVHSANPLSRRHSRTLVCERCNSQPATVRCVEDKISLCQNCDWTEHRDSAASLGHKRQTINCYSGCPSAAELSRIWSFILDFPSMDASKCEEGMGLMSIDENTVSNSWGPPEKSSTVDLTVSGRMNDVENVDKFGIWMGSSSVPAVQCCVDQPAGSVDSTTPKLCCPGTKSLGLCEDDLYEDFNVDDVDLDFENYEELFGVSQNHLEQGFGDSVIDSLFGVKDMSVADSNCQDEFVAEVFSITYSSLASGTPSFIYNYFFF* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00625 291 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Eupl02g00625 291 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Eupl02g00625 291 CDD Bbox1_BBX-like 47 90 - -
Eupl02g00625 291 SMART bboxneu5 48 90 IPR000315 GO:0008270
Eupl02g00625 291 SMART bboxneu5 1 47 IPR000315 GO:0008270
Eupl02g00625 291 CDD Bbox1_BBX-like 4 47 - -
Eupl02g00625 291 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 254 - -
Eupl02g00625 291 Pfam B-box zinc finger 46 90 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00625 Eupl-Chr2 7218775 7223606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00625 1 249 C2C2-CO-like Transcription Factor Family AT3G07650 51.163 2.65e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl02g00625 zf-B_box 2.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00625 - - nnu:104588684 405.216