Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00620 ATGGGTCTTTCAAGCCTCCCTGCTCCTTCCGAAGGAGTTCTCTGCATCATCCTGGTGAACACAGCCATATCGATCTCGATCTTCAAAGGTATTGTGCGATCAATCCTCCAAATCGTCGGAATTCGTCTATCATCATCTTCTGATTCCGTCGAAGCTCCATCAGAACCGTTCGAATTCCGTCTAGCCCCATCAGAGACCTTCATGGAGGAGTTCCGAAGCCAGATACCGGCCATCCGATTCGACTCGGTGTTTAACTGCACCCAGTCCGAGCACGATTGCCCAGTCTGTCTGATCCGGTTCGAACCCGACTCAGAGATAAACCGCTTGTGTTGTGGCCATGTTTTCCATAAAGTCTGTTTGGAGAAGTGGTTGGACTATTGGAATATCACGTGCCCTCTTTGTAGAACTCCTCTAATGCCCGAAGAAGAAACGTCTTGCGACTCTTTCCTTTGGTAG 456 0.4934 MGLSSLPAPSEGVLCIILVNTAISISIFKGIVRSILQIVGIRLSSSSDSVEAPSEPFEFRLAPSETFMEEFRSQIPAIRFDSVFNCTQSEHDCPVCLIRFEPDSEINRLCCGHVFHKVCLEKWLDYWNITCPLCRTPLMPEEETSCDSFLW* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00620 151 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 140 IPR013083 -
Eupl02g00620 151 SUPERFAMILY RING/U-box 87 141 - -
Eupl02g00620 151 ProSiteProfiles Zinc finger RING-type profile. 93 135 IPR001841 -
Eupl02g00620 151 SMART ring_2 93 134 IPR001841 -
Eupl02g00620 151 Pfam Ring finger domain 92 135 IPR001841 -
Eupl02g00620 151 PANTHER - 1 143 IPR044249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00620 Eupl-Chr2 7182053 7184282 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00620 1 143 C3H Transcription Factor Family AT2G04240 58.710 1.35e-55 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00620 K16285 - vvi:100244155 243.817