Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00601 ATGGCCTCAAAAAATAGTGCTAGAGCTTGCTCAGAACAGCAGCAGAAAACAGCTGGTAATCAAACAGTAGAGGCGAATACCCGCCGGCTTTCGTCTTTGCAGGTTTCGAAGTCCAGCAAATCCGAGCCAGTTACCCCAAAAAAATTACCTTGCACTGTGCCACAAGTTGCAGCAAAGCAGTATACCGCGGAAGCCTTGGAGGACCAAAGAACACCGAATCTTCATCAGAAGGGGTCTGCCGATCCTTTACCTGATAAGTTAGATTCAAATTCCTCCTCAAGAGGTCCAAAACAATCTCCAACACATGTAGATCCTGCAGTGAATATTAGAGGCTCACTGGAAGGTGGTGTGGATCAAGACAAGAAAACATCTGAGCATGGCAGTGTAAAGGATAGCTCAGCTTCTGCTAAAGTTAGCGATGGGACCAGCAGTTTCACCAAGACCAGTGGAAGTGCCAAAATTAGTGATCGTGCTGATTTTGTTGAGAGTGGCAAGAGCAGTATGTGTAGAGGAAGCACAAGCAGTGACGTGAGTGATGAGAGTACTTGCAGCAGCATTAGTAGCAGTATCAGTAAGCCGCACAAAGCGAATGATTCAAGATGGGAAGCAATTCAGGCAGTGCGAGCAAAAGATGGGGTCTTGGGTTTGAGCCATTTCAGACTACTTAAGAAGTTGGGCTGTGGGGATATTGGGAGTGTCTATCTGTCGGAATTGAGTGGGACTAGGAGTTATTTTGCAATGAAGGTTATGGACAAGGGGACTCTAGCTGGCCGTAAGAAGCTGCTTCGAGCTCAGACAGAAAGAGAGATACTACAATCTTTGGACCATCCGTTCCTTCCAACGTTATATACCCATTTTGAGACAGAGAAGTTCTCGTGTTTGTTGATGGAGTTCTGCCCGGGCGGTGACTTGCACACTCTCCGACAAAGGCAGCCAGGGAAACATTTCTCTGAACAGGCCGTGAAGTTTTATGTAGCAGAGGTCCTCCTTGCTCTGGAGTACCTCCACATGCTCGGGATTGTCTACCGCGACCTCAAGCCAGAAAATGTCCTTGTGAGGGAAGATGGACACATAATGCTCTCTGACTTCGACCTCTCTCTTCGCTGTGCCGTCAGCCCAACTCTTGTCAAGTCCTCATCTATCGAGTCTGAACCCTTCCGGAAAAACCCTGTTTATTGTGTCCAGCCAGCTTGCATTGAGCCCTCATGTATCCAGCCATCTTGTGTGGCCCCCACAACATGCTTCTCCCCCCGGCTCTTCTCCAGCAAGTCAAAGAAGGACCGCAAACCCAAAAATGAGATCGGAAACCAAGTCAGCCCATTGCCTGAGCTCATTGCTGAACCAACAGGGGCCCGTTCAATGTCATTTGTGGGGACCCATGAGTACTTGGCTCCAGAGATCATCAAAGGCGAAGGCCATGGGAGTGCAGTAGATTGGTGGACTTACGGGATCTTTCTCTATGAGCTTTTGTTTGGTAAGACTCCTTTCAAGGGATCAGGGAATCGGGCCACGCTGTTCAACGTTGTGGGTCAGCCTTTGCGTTTCCCAGAGTCACCAGCTGTTAGTTTCCAAGCAAGAGATCTAATAAGAGGGCTGCTCGTGAAGGAGCCGCAGCACCGATTGGCATATAAGCGTGGAGCAACAGAGATTAGGCAACACCCCTTCTTTGAAGGCGTGAATTGGGCTTTGGTACGCTGTGCCAGCCCACCAGAGATCCCAAAACCAGTCGAGATCGAGCGTATCCCGGTCCCCACAGCGTCAACAAGCGAAAAGGCTGCCGTCGCGACGCCCAATCAGAAAAGTTCAGATAATTATCTCGAATTCGATTTCTTTTAG 1836 0.4913 MASKNSARACSEQQQKTAGNQTVEANTRRLSSLQVSKSSKSEPVTPKKLPCTVPQVAAKQYTAEALEDQRTPNLHQKGSADPLPDKLDSNSSSRGPKQSPTHVDPAVNIRGSLEGGVDQDKKTSEHGSVKDSSASAKVSDGTSSFTKTSGSAKISDRADFVESGKSSMCRGSTSSDVSDESTCSSISSSISKPHKANDSRWEAIQAVRAKDGVLGLSHFRLLKKLGCGDIGSVYLSELSGTRSYFAMKVMDKGTLAGRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLLMEFCPGGDLHTLRQRQPGKHFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSSIESEPFRKNPVYCVQPACIEPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKNEIGNQVSPLPELIAEPTGARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTYGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPAVSFQARDLIRGLLVKEPQHRLAYKRGATEIRQHPFFEGVNWALVRCASPPEIPKPVEIERIPVPTASTSEKAAVATPNQKSSDNYLEFDFF* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00601 611 ProSiteProfiles Protein kinase domain profile. 219 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00601 611 MobiDBLite consensus disorder prediction 166 194 - -
Eupl02g00601 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 340 352 IPR008271 GO:0004672|GO:0006468
Eupl02g00601 611 SMART serkin_6 219 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00601 611 MobiDBLite consensus disorder prediction 85 99 - -
Eupl02g00601 611 SUPERFAMILY Protein kinase-like (PK-like) 193 590 IPR011009 -
Eupl02g00601 611 MobiDBLite consensus disorder prediction 1 194 - -
Eupl02g00601 611 Gene3D Transferase(Phosphotransferase) domain 1 303 370 - -
Eupl02g00601 611 Pfam Protein kinase domain 220 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00601 611 Pfam Protein kinase domain 453 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00601 611 PANTHER FLIPPASE KINASE 1-RELATED 36 579 - -
Eupl02g00601 611 Gene3D Phosphorylase Kinase; domain 1 217 302 - -
Eupl02g00601 611 FunFam Serine/threonine-protein kinase D6PK-like 217 302 - -
Eupl02g00601 611 Gene3D Transferase(Phosphotransferase) domain 1 452 574 - -
Eupl02g00601 611 FunFam Serine/threonine-protein kinase AGC1-7 449 574 - -
Eupl02g00601 611 FunFam serine/threonine-protein kinase D6PK-like 303 370 - -
Eupl02g00601 611 CDD STKc_phototropin_like 217 579 - -
Eupl02g00601 611 MobiDBLite consensus disorder prediction 129 153 - -
Eupl02g00601 611 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00601 Eupl-Chr2 6977555 6988176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00601 67 611 AGC Kinase Gene Family AT5G47750 78.871 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Eupl02g00601 Pkinase 4.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00601 K08286 - nnu:104594275 997.653