LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl02g00579	ATGAATTCACCTCCAAGAAATCTTCTCCTTCTCTTCTCTTTCTCCCTTTTCTTTGAATTTTCAAACGTCCCCTCGACGTTTGCAGAGAATTTGAGGTTCGAATTCCCTTCTTTCACTCTCCGTAATCTCACTCTCCTCGGTGATTCTTACCTCAGGAATGGCATCATCGGACTTACCCGAGAGCTTGGCGTACCCTCTTCGAGCTCCGGCAGCGTTGTCTGCAACACCCCTGTCCTCTTCTTTGATCCAGACACGAATGTCTCAGCTTCTTTCTCAACGGAATTTTCTTTCTCGATCACCAACATTAATCCAGGATCGTACGGCCATGGGCTGACCTTCTTTCTATCCCCCAATAACAAGACCATCGGAAGCCCAGGTGCGTATCTGGGTCTTGTTAATTCGTCAAAACCAATCGAAAAAAAGTTTGTCGCCGTAGAATTCGATACCCATTTGGATTCCCAATTTCATGATCCGAACGAGAATCACGTTGGGTTGGATATTGGAAGCCTCATTTCAATCAAGACCACGGACCTATCATTGCACGGGATTGATCTCAAGAGTGGGAATTTGATTACGGCGTGGATTGATTACAAGAACGACAAGAAGACGTTGGAGGTCTGGATGAGTTACTCGAGTTTCAGGCCTGAGGAGCCTATTTTGTCGGTGGAGATTGACCTCTCTATGTATTTCAAGAAGCTTATGTATGTGGGGTTCTCGGCGTCGACAGAGGGGAGCACAGAGCTTCATTTGATCGAGGATTGGACCTTTCAGACTTTTGGGTTCCGCCCAGTGAAAGCCCGGTTGCCTCATAATGTTTCCGATAACTCGTTGACTATGATTCCGTTTAATCCTGTCTCCAACTCTAGCAACAATGGCCACAAGAAACTCGCTTTAGGCCTTGGAATTGCTGGTCCAGCCTTCTTTTGCATCGTTCTAGTGGTGTTTGGTTGGATTTCTGTTAAGAAATGGAGGACAATCAGGACAGACAATAGCTTCAAACCAGAGCTTCTGAAAGGCCCAAGACAATTCAGTTATAGAGAGCTGAAATCTGCCACGAGAGGGTTTCATTCCAGCCGAATTGTGGGGCATGGATCATTCGGGACCGTTTACAAAGCCATTTTTCCTGGGTCAGGCACTACTTTTGCAGTGAAAAGATCGAAACATTCACACGAAGGTAAAACTGAATTCCTTGCTGAACTATCCATAATAGCTTGTTTGAGACACAAAAATCTAGTTCAGCTCCAAGGTTGGTGCGTCGAGAAGAATGAGTTATTGCTTGTGTATGAGTTCATGTCCAATGGGAGCCTTGATAAAGTCCTTTACTCAGAACCCGAAGATGGAATCCCTCTAAAATGGTTCCAGAGGTACAACATTGCGTTGGGGATTGCCTCTGTTCTGACTTACTTACACCAGGAATGTGAGCAACAAGTCATTCACAGGGATATAAAGACCAGTAATATAATGTTGGACGGAAACTTCAATCCGAGGTTAGGGGATTTCGGCCTAGCGAGGCTCATGGATCACGACAAGAGCCCTGTTTCGACTCTGACCGCTGGGACGATGGGGTACCTTGCCCCTGAGTATCTCCAGTATGGGAAAGCAATTGATAAAACAGATGTTTTCAGTTTTGGTGTGGTTATACTTGAATTGGCTTGTGGGAGGAGGCCTATTGAGAAAGAACCAAATAGTCAGACGATGGTTAATTTGATAGATTGGGTTTGGGGTTTGCACTCTAAAGGCAACCTCATTGAAGCAGCAGACAAAAGGTTGAATGGTGAATTTAAGGAGGAAGAAATGAGAAAGCTGTTGCTTGTGGGTCTGAGTTGTGCGAACCCAGCATATACAGAGAGGCCTTCGATGAGGAGGGTCCTTCAGATCCTTAATGAGGAGGCTGAGCTTCTGGTCGTGCCGAGGACAAAACCCACTCTTACATTCTCTTGCAGCTTGCCGTTGAGCATCGACGATATTGTTTCTGACTGTGAGGATGTTGTTTCTGACTGCAGAGACAGTGGGACACATAGCCCTTCGTATGTGATCAGCATCAACTGA	2049	0.4578	MNSPPRNLLLLFSFSLFFEFSNVPSTFAENLRFEFPSFTLRNLTLLGDSYLRNGIIGLTRELGVPSSSSGSVVCNTPVLFFDPDTNVSASFSTEFSFSITNINPGSYGHGLTFFLSPNNKTIGSPGAYLGLVNSSKPIEKKFVAVEFDTHLDSQFHDPNENHVGLDIGSLISIKTTDLSLHGIDLKSGNLITAWIDYKNDKKTLEVWMSYSSFRPEEPILSVEIDLSMYFKKLMYVGFSASTEGSTELHLIEDWTFQTFGFRPVKARLPHNVSDNSLTMIPFNPVSNSSNNGHKKLALGLGIAGPAFFCIVLVVFGWISVKKWRTIRTDNSFKPELLKGPRQFSYRELKSATRGFHSSRIVGHGSFGTVYKAIFPGSGTTFAVKRSKHSHEGKTEFLAELSIIACLRHKNLVQLQGWCVEKNELLLVYEFMSNGSLDKVLYSEPEDGIPLKWFQRYNIALGIASVLTYLHQECEQQVIHRDIKTSNIMLDGNFNPRLGDFGLARLMDHDKSPVSTLTAGTMGYLAPEYLQYGKAIDKTDVFSFGVVILELACGRRPIEKEPNSQTMVNLIDWVWGLHSKGNLIEAADKRLNGEFKEEEMRKLLLVGLSCANPAYTERPSMRRVLQILNEEAELLVVPRTKPTLTFSCSLPLSIDDIVSDCEDVVSDCRDSGTHSPSYVISIN*	683

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl02g00579	682	CDD	STKc_IRAK	361	629	-	-
	Eupl02g00579	682	FunFam	L-type lectin-domain containing receptor kinase VIII.1	319	430	-	-
	Eupl02g00579	682	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	477	489	IPR008271	GO:0004672\|GO:0006468
	Eupl02g00579	682	Gene3D	Phosphorylase Kinase; domain 1	318	430	-	-
	Eupl02g00579	682	Pfam	Protein kinase domain	355	625	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl02g00579	682	FunFam	L-type lectin-domain containing receptor kinase VIII.1	29	268	-	-
	Eupl02g00579	682	Gene3D	Transferase(Phosphotransferase) domain 1	431	636	-	-
	Eupl02g00579	682	SUPERFAMILY	Protein kinase-like (PK-like)	337	648	IPR011009	-
	Eupl02g00579	682	ProSitePatterns	Protein kinases ATP-binding region signature.	361	384	IPR017441	GO:0005524
	Eupl02g00579	682	ProSiteProfiles	Protein kinase domain profile.	355	634	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl02g00579	682	SMART	serkin_6	355	626	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl02g00579	682	ProSitePatterns	Legume lectins beta-chain signature.	143	149	IPR019825	-
	Eupl02g00579	682	SUPERFAMILY	Concanavalin A-like lectins/glucanases	30	261	IPR013320	-
	Eupl02g00579	682	Gene3D	-	28	265	-	-
	Eupl02g00579	682	Pfam	Legume lectin domain	31	259	IPR001220	GO:0030246
	Eupl02g00579	682	PANTHER	-	58	637	-	-
	Eupl02g00579	682	FunFam	L-type lectin-domain containing receptor kinase VIII.1	431	645	-	-
	Eupl02g00579	682	CDD	lectin_legume_LecRK_Arcelin_ConA	31	260	IPR001220	GO:0030246

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl02g00579	Eupl-Chr2	6639337	6642542	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl02g00579	6	662	Receptor kinase-like Gene Family	AT5G55830	62.593	0.0	843

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Eupl02g00579		Pkinase	5.8e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl02g00579	-		-	nnu:104594259	1021.15