Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl02g00567 | ATGGCGGATTCCGATAATGACTCCGGCGGTCAGTACAACAACGCGAACAGCGACTTCTCGCCGCGAGAGCAGGACAGGTTCCTGCCCATCGCTAACGTGAGCCGGATCATGAAGAAAGCGCTCCCTGCCAACGCAAAGATCTCCAAAGACGCTAAAGAGACGGTACAAGAGTGTGTATCGGAGTTCATAAGCTTTATCACTGGAGAAGCTTCCGATAAGTGTCAAAGAGAGAAGCGAAAGACTATCAACGGTGATGATCTTCTCTGGGCCATGACCACGCTAGGTTTCGAAGAGTACGTGGAGCCATTGAAGATATATCTCCAGAAGTTTCGAGAGATGGAAGGAGAGAAGACCTCGATGGGAAGACAAGGCGAAAAGGACGGCTCCAGTGGTGGTGGCACTGGAGGTGGAGGAGCCGCCGGTAGTGGCAATGGCGGTGTTGTAAATTCTGGCAACAGTGGGGGTGGTTTCAATGTAGGGAGTATGTATGGTGGAATGCAATCGAGCGTGATGATGATGGGACATCAAGGGCAGATGTATGGCTCCGGTTCGTATCATCATATGGCTGTAGGTGGCAGTGGGCCCGGGAAAGGCAGTTCGGGCAGCACGGGTAGTGCTGGTGGTGGAGGTTCGTCTGGCAGACCAAGGTAA | 651 | 0.53 | MADSDNDSGGQYNNANSDFSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQKFREMEGEKTSMGRQGEKDGSSGGGTGGGGAAGSGNGGVVNSGNSGGGFNVGSMYGGMQSSVMMMGHQGQMYGSGSYHHMAVGGSGPGKGSSGSTGSAGGGGSSGRPR* | 217 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl02g00567 | 216 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Eupl02g00567 | 216 | Gene3D | Histone, subunit A | 16 | 133 | IPR009072 | GO:0046982 | |
Eupl02g00567 | 216 | PRINTS | CCAAT-binding transcription factor subunit A signature | 74 | 92 | - | - | |
Eupl02g00567 | 216 | PRINTS | CCAAT-binding transcription factor subunit A signature | 93 | 111 | - | - | |
Eupl02g00567 | 216 | PRINTS | CCAAT-binding transcription factor subunit A signature | 55 | 73 | - | - | |
Eupl02g00567 | 216 | SUPERFAMILY | Histone-fold | 24 | 130 | IPR009072 | GO:0046982 | |
Eupl02g00567 | 216 | ProSitePatterns | NF-YB/HAP3 subunit signature. | 58 | 74 | IPR003956 | GO:0005634|GO:0006355|GO:0043565 | |
Eupl02g00567 | 216 | MobiDBLite | consensus disorder prediction | 188 | 216 | - | - | |
Eupl02g00567 | 216 | FunFam | Nuclear transcription factor Y subunit B-3 | 16 | 135 | - | - | |
Eupl02g00567 | 216 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 27 | 91 | IPR003958 | - | |
Eupl02g00567 | 216 | PANTHER | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 7 | 145 | IPR027113 | GO:0001228|GO:0006355|GO:0016602 | |
Eupl02g00567 | 216 | MobiDBLite | consensus disorder prediction | 115 | 147 | - | - | |
Eupl02g00567 | 216 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl02g00567 | Eupl-Chr2 | 6544298 | 6545874 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl02g00567 | 1 | 127 | CCAAT-HAP3 Transcription Factor Family | AT4G14540 | 85.938 | 2.73e-77 | 228 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NF-YB | Eupl02g00567 | CBFD_NFYB_HMF | 2.2e-27 | CL0012 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl02g00567 | K08065 | - | nnu:104594247 | 297.745 |