Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00562 ATGGAAAGCACAAGCCAATATGACTCATTGGGTGATGCGACATTTGAAGACGTTCCTGAATGTGGAGATACTCGTGCAGCAGAAGGAATTCCTTCGTCGGATGAATTCTGTGCACTCAATGAGGTGACATTTTCCAAGCCATTTGTTGGGATGGAGTTTGACTCTCCTGATAAGGCATATTTCTTCTACAATGAATATGCTAGGATTGTGGGTTTCAGCATACGGAAAGCTAAAAATCGTAGGTCAAATATTGATGGAGCACTTCTCTTTCAACGATTCTGTTGTTCGAAGGAGGGTCATCGTCGAAAAAGGCGGGAAAATGATAATGATGAACCAAAGAGAGTGAAAGATGGTGTCGTAGTGAAGGTGAGGAGAAGAATGGTACGGTCCACAAGAGTTGGTTGCAGTGCAAAGTTAGATGTCAAAAAAACAGCCGATGGTAGATGGGTTATACAAAAATTTGATGAAGAACATAACCATGAATGTGCTCATCAGGGAGAAAAGCATTTGTTGAGGTCTCAAAGACGCATACAATCTGGTCAAGGACAACAAAGTGATAGTGGGAGTGAAGGAAGGAGGAGGAAACCTGAAAAAGGAGATGTTAAGGTTGTCCTCAATTACTTTACACAAATGCAAACCGAGAATCCATCCTTCTTTCATGCAATACAGTCTGGTAAAGAGGACCAGCTGTTAAACTTTGTTTGGGCCGATGCAAGATCAAGGATGGATTTTGGTTACTTTGGGGATGTTATTTACTTCAGCACAACCTATGGGACTAACAAGTATGGACAGCCATTTTCTCCAATTCTAGGTGTAAATCATCACCTACAAACAGTCTTGTTTGGTTGTACAATACTTTTTAATGAAAACGAGGAGTCATTTGTTTGGTTGTTAGAGACCTTTTTGAAAGCGATGTATGGGCGTCGTCCAATTGCAATAATTACTGATCAAGATGCAGCAATGGCGAGAGCAATTGAACGAGTCTTACCGGGAACCCACCACCGTTTATGTTTGTGGCACATCTTCCAGGATGCAGCTAAACATTTGAGTCATTTGTACAATACACAGGATGATTTTAGTACTGATTTCCAGAAATGTATCTGTGAGCCCCGTTGGTGTGATGAGTTTGAGTCAAGGTGGGCATTATTACTCGACAAATATGAACTTTGTGATAATGAGTGGCTTGATAATATGTATGAGAAACGACACAAATGGGTTCCAGTCTACTCAAGGCACATCTTCCATGCAGACATGGCGACAACTCAACGGATCGAAAGTATTAACTCCTTCTTTAATGGATACCTGAACCTGAATGGGGCACTTCCTCTTAGTGAGTTTGTTAAACAGTATGAAAATGTACTTCTCTGTAGACGTGAAGAGGAAACTTATGAAGATTTTCAGTCCCATCAAACAAGGCCTGTTTTGAAGTTGGACCTTCCAATGGAACAACAAGCAGCTGACATTTACACAAGATCAGTGTTTAAAGAGTTCCACAAAGAGTTTTGTGAGAGTTTTAACTACATTGCTGAAGAAACGCAAAGGTTAGGGACAAATTGGACATATGCAGTGTCAAGGTGGGGCCAAAATAGGAATTGCCTTGTTAATTTCAGCTCTTGCGATAATGATATTCGGGTGACTTGTGACTGTCAGAATTTCGAGTTCACAGGCATTCTATGTAGGCATATCTTCAAAGTCTTCACAATAAGAAACGTTATGTTGGTTCCAGAGGTCTACTTTAAAAAAAGGTGGACAAAAAAAGGCAAGCTTGGGGTTGTTTTGAATGAAAGTGGTGTGGAAATGCAAGCTGACTGTCAAAAATCGCTGACCTTGCGCTACAATGATCTTTGCCACCTATCTTTTAACCTTTGTGCTAAGTCAGCAGTCTCTATAGATGCTTACCAGATTGCGAAGTGTAATATGGAACTGATATTAGGAGAATTAGAAGATGTTGCTGAGGAAGACATGAGTGACACTCAACCTGACATTGAGCACTTTAGAAATTTGCATCTTCCGGTCGAGATGATTAATAATATCGGGAGCTCCAATCGCCTTATCATTGAAGAAAATCAGATGTTATCTTCAGCCAACCAAGTAACTTTGCAAAATCCACCAAGAGTCGGGGATAAAAGAACTGGTTTTTGGTTACGTTTATAA 2154 0.4048 MESTSQYDSLGDATFEDVPECGDTRAAEGIPSSDEFCALNEVTFSKPFVGMEFDSPDKAYFFYNEYARIVGFSIRKAKNRRSNIDGALLFQRFCCSKEGHRRKRRENDNDEPKRVKDGVVVKVRRRMVRSTRVGCSAKLDVKKTADGRWVIQKFDEEHNHECAHQGEKHLLRSQRRIQSGQGQQSDSGSEGRRRKPEKGDVKVVLNYFTQMQTENPSFFHAIQSGKEDQLLNFVWADARSRMDFGYFGDVIYFSTTYGTNKYGQPFSPILGVNHHLQTVLFGCTILFNENEESFVWLLETFLKAMYGRRPIAIITDQDAAMARAIERVLPGTHHRLCLWHIFQDAAKHLSHLYNTQDDFSTDFQKCICEPRWCDEFESRWALLLDKYELCDNEWLDNMYEKRHKWVPVYSRHIFHADMATTQRIESINSFFNGYLNLNGALPLSEFVKQYENVLLCRREEETYEDFQSHQTRPVLKLDLPMEQQAADIYTRSVFKEFHKEFCESFNYIAEETQRLGTNWTYAVSRWGQNRNCLVNFSSCDNDIRVTCDCQNFEFTGILCRHIFKVFTIRNVMLVPEVYFKKRWTKKGKLGVVLNESGVEMQADCQKSLTLRYNDLCHLSFNLCAKSAVSIDAYQIAKCNMELILGELEDVAEEDMSDTQPDIEHFRNLHLPVEMINNIGSSNRLIIEENQMLSSANQVTLQNPPRVGDKRTGFWLRL* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00562 717 SMART 26again6 545 572 IPR006564 GO:0008270
Eupl02g00562 717 MobiDBLite consensus disorder prediction 162 198 - -
Eupl02g00562 717 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 43 646 IPR031052 GO:0006355
Eupl02g00562 717 ProSiteProfiles Zinc finger SWIM-type profile. 532 570 IPR007527 GO:0008270
Eupl02g00562 717 Pfam SWIM zinc finger 546 566 IPR007527 GO:0008270
Eupl02g00562 717 Pfam MULE transposase domain 250 343 IPR018289 -
Eupl02g00562 717 Pfam FAR1 DNA-binding domain 62 163 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00562 Eupl-Chr2 6488807 6492630 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl02g00562 FAR1 1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00562 - - psom:113348902 987.638