Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00550 ATGGCCCATAATGATGCAAAACAGCCCTTGATCACGGGGTTATTAGATCCTTCCCATCAACCCACTGAAAAGAATGACGCCAAGAGAAGAAGATATCGCCGTTGTAAAAGTGCTCCTACAGATTACATTCTCCCAGAAAAAATGGCTTCTGCATCCATATTTGCTAAACTCCACCCTAGCTTTAGGCAAGTGGCCTTATTCTTGGTTGTCTACCTCGGTGTAGGAACCCTCTGCTTCTACCTCGTCAAGGATCAGATCAGGGGTAATAAAACAAATGGGATTCTTGATGCTGTGTATTTATGCATTGTGACAATGACCACTGTCGGATATGGAGACCTCGTCCCCAATAGCAACATCACCAAACTACTTGCATGTGCCTTTGTCTTTACGGGAATGGCTCTTGTTGGACTAATTCTTAGTAATTCAGCAGACTACCTCGTTGAAAAGCAGGAAATGCTGTTGGTTAAAGCCCTACACATGCATCAAAATGTTGGTGCAACTGAGATTCTCAAGGAGATCGAAACCAACAAAGTGAAATACAAGTTTCTTATGATCTTGACGCTTCTTCTGGTGCTTATAGTTGTTGGAACAGTCTTCTTATGTACAGTTGAGAATATGGAACTTGTCGATGCCTTCTATTGTGTTTGTTCCACCATCACAACTTTGGGGTACGGGGACAAGAGCTTCTCAACCAATGCAGGGCGTATCTTCGCTGTGTTTTGGATACTGACCACTACCATCTGTTTGGCTCAGTTCTTCCTCTACCTTGCTGAGCTAACTAGCGAGCGAAGACAACAAGCGCTTGTCAAATCTGTTCTTACGCGAAGGATGACATACATAGATCTTGAGGCAGCGGATCTTGATGATGATGGAATTGTGAGTGCTGCTGAATTTATTTTATATAAACTCAAGGAGATGGGCAAGATCAGCGAAGAAGATATTGTACTTGTGTTGAAGGAGTTTGAGGATCTTGATGTTGATCAATCTGGGACACTGTCAGCATCTGATATAATGCTTGCTCAATCCTCTCAAACAGAGAGCTGA 1044 0.4301 MAHNDAKQPLITGLLDPSHQPTEKNDAKRRRYRRCKSAPTDYILPEKMASASIFAKLHPSFRQVALFLVVYLGVGTLCFYLVKDQIRGNKTNGILDAVYLCIVTMTTVGYGDLVPNSNITKLLACAFVFTGMALVGLILSNSADYLVEKQEMLLVKALHMHQNVGATEILKEIETNKVKYKFLMILTLLLVLIVVGTVFLCTVENMELVDAFYCVCSTITTLGYGDKSFSTNAGRIFAVFWILTTTICLAQFFLYLAELTSERRQQALVKSVLTRRMTYIDLEAADLDDDGIVSAAEFILYKLKEMGKISEEDIVLVLKEFEDLDVDQSGTLSASDIMLAQSSQTES* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00550 347 PRINTS Two pore domain K+ channel signature 103 131 IPR003280 GO:0005267|GO:0016020|GO:0071805
Eupl02g00550 347 PRINTS Two pore domain K+ channel signature 220 229 IPR003280 GO:0005267|GO:0016020|GO:0071805
Eupl02g00550 347 SUPERFAMILY Voltage-gated potassium channels 56 159 - -
Eupl02g00550 347 FunFam Calcium-activated outward-rectifying potassium channel 1 58 153 - -
Eupl02g00550 347 ProSitePatterns EF-hand calcium-binding domain. 286 298 IPR018247 -
Eupl02g00550 347 FunFam Two-pore potassium channel 1 162 270 - -
Eupl02g00550 347 ProSitePatterns EF-hand calcium-binding domain. 325 337 IPR018247 -
Eupl02g00550 347 MobiDBLite consensus disorder prediction 1 31 - -
Eupl02g00550 347 SUPERFAMILY Voltage-gated potassium channels 174 278 - -
Eupl02g00550 347 Pfam Ion channel 67 147 IPR013099 -
Eupl02g00550 347 Pfam Ion channel 188 259 IPR013099 -
Eupl02g00550 347 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 63 315 IPR003280 GO:0005267|GO:0016020|GO:0071805
Eupl02g00550 347 Gene3D - 162 273 - -
Eupl02g00550 347 SUPERFAMILY EF-hand 282 339 IPR011992 -
Eupl02g00550 347 Gene3D - 58 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00550 Eupl-Chr2 6388567 6391516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00550 45 344 Ion Channels AT5G55630 64.667 1.22e-146 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00550 K05389 - msin:131229127 502.286