Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00544 ATGTCTGTGAATGCTCATGGTTTCCTGGAATGGGAAGAGCAGTTTGTTTCGCAGGAGCGGGGTAGCCGAGTGGTTCACTATTACTTAAAGGATACAGCTGGGGATTCCATCCTTGCTGTTGTGGGCACTGAGAGAAGTCTCAGGCACATGGTTTATGTAATTTCTGAGGAGTTCTTGAAGGTATATGGGTCTGAGAAGTCCATCAGTGCTTGCTTCAAATGGAGATCGAAAAGAGAGGTGGTGGACTGGCTCACTTCGTTGCTCTCGAAGCAGTGTCCTCCTGGAGATTGTTCTAAATCACCTACAAATGATCCAAAACAAGCTTTAGGATCTCCTAACTTCTCAATAAATGGACTCAATGCTCCAGGGACCCATCTACAAGATCACACGGGCCGGTTTGCGAGGAAGCTGAAAAGCCACAATTCAGACATTGTGTGGTCAGGCGATGCCTGGACCTGTGGTAAACAGCTCAAACATTACCCAGCATTTTGCAGGAATGGGACCACCATAAGTGTTCGTTCCTTTGTTCTTGTCATGGCTAAAGAAGAAATCCACTATCTCGCATACTTGGAAGATATGTATGAAGATAGGAAGGGGCAGAAGAAGGTTAAAGTGCGGTGGTTTCATCATAATCAGGAAGTCGAGGGTGTAATTCCCCTACCGAATCCACACCCGAGAGAAGTTTTCTTCACACCTTATGCTCAGGTCATTAGTGTGGAATGTGTGGACGGTCCAGCCACAATTTTAACTCCTGAGCACTATGAGAAATGCTTGGCCATTCTTCTGCAAACTTCATCAGCCAGAGTCCATCTGTGCTTTAGGCAGTTTAGAAACAACAGAGTCAAGCCCTTTGATCTAAGTAAATTGCGGGGATATTTTGATCAAACAATCCTCTCGTGTTTAGAAGAAGAGGAAGAATTTAGCCAAGGAGGCACTATAAAGCATAGAGCTAAGAGGACTAGAAGTTGCAGAGGTCGTCAGAGATTTGTGACAAGTCCTTCTGTTGTCAGAATTTCCGGCCAGGGGAACCAGATAACAGCCTCTGGACCAGCAAATCGGAATTTGAGATTTAGGTTATCAGGTAGGAGGCCGCTGGCTGTCAAGTATGTTGAGCCCCAGCCTTGGCTACCCCCACCTTTTAAGGTCAATGAAAAGATAGAGCTGCTGTGTCAAGATAGTGGCATCCGAGGCTGTTGGTTCAGGTGTACAATCTTGCAGGCATCTCGGAAGCAGCTGAAGGTCCAATATGATGATGTGCAGAATGAAGATGGAAGTGGGAATCTAGAGGAATGGATCCCTGCTTTCAGATTGGCAGCTCCTGATAAATTGGGTTTGAGATGCTTAGGCCGCGTAATGATCCGGCCATGCCCCCTCCCTGATGATCGAACAGACGGTGTTTTCGAGGTTGGAGCCCCAGTGGACGCATGGTGGAGCGATGGCTGGTGGGAAGGAGTGGTAACTGGAATTGGCAACTGTGGAGATGATAGTCTACAAGTTTACTTCCCTGGTGAGGAGTTGTTCTCAACTTTCCAAAGAAGTAATCTGAGGAGTTCCAGGGATTGGGTAGGGAATCAGTGGGTTGGCATCGAGGCCAAGCCAGATATACTCTCTGTCATATCTACAGCTGCGAGCCCTGGCACAAAGCTCTCTGGATGCTCAACTATCGCCAAGAAAGCTGAGTCTGGTGGCTCTGCAATGTCGGACCGTGAAGTGCCCACTACTTCCAAACTTGATACAGTTGAAGAGGATAAGCAAGAGGTAGCTGGTTCAGCTGGATCCAATGGCCTCCCAGAACATGTTGAGTGTGTGAACTTGAGGAAGCGGCCATGGAGTGAAGACCAAGGCAAGGGAGGTGGTGATGATGATGGTCAAGATGAAGATGAAGATGAAGATGAAGATGAAGTTGAAGATGAAGATGATGATGACAGTGACAAGTTGGATGTGAAGAAGGATATTGAGGCTGCTGGCCACAAATGTGAATCAGTAGGACTAATGGAAGTGGCTGCATAA 2010 0.4721 MSVNAHGFLEWEEQFVSQERGSRVVHYYLKDTAGDSILAVVGTERSLRHMVYVISEEFLKVYGSEKSISACFKWRSKREVVDWLTSLLSKQCPPGDCSKSPTNDPKQALGSPNFSINGLNAPGTHLQDHTGRFARKLKSHNSDIVWSGDAWTCGKQLKHYPAFCRNGTTISVRSFVLVMAKEEIHYLAYLEDMYEDRKGQKKVKVRWFHHNQEVEGVIPLPNPHPREVFFTPYAQVISVECVDGPATILTPEHYEKCLAILLQTSSARVHLCFRQFRNNRVKPFDLSKLRGYFDQTILSCLEEEEEFSQGGTIKHRAKRTRSCRGRQRFVTSPSVVRISGQGNQITASGPANRNLRFRLSGRRPLAVKYVEPQPWLPPPFKVNEKIELLCQDSGIRGCWFRCTILQASRKQLKVQYDDVQNEDGSGNLEEWIPAFRLAAPDKLGLRCLGRVMIRPCPLPDDRTDGVFEVGAPVDAWWSDGWWEGVVTGIGNCGDDSLQVYFPGEELFSTFQRSNLRSSRDWVGNQWVGIEAKPDILSVISTAASPGTKLSGCSTIAKKAESGGSAMSDREVPTTSKLDTVEEDKQEVAGSAGSNGLPEHVECVNLRKRPWSEDQGKGGGDDDGQDEDEDEDEDEVEDEDDDDSDKLDVKKDIEAAGHKCESVGLMEVAA* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00544 669 ProSiteProfiles BAH domain profile. 168 287 IPR001025 GO:0003682
Eupl02g00544 669 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 379 649 - -
Eupl02g00544 669 SMART agenet_At_2 378 443 IPR014002 -
Eupl02g00544 669 SMART agenet_At_2 465 523 IPR014002 -
Eupl02g00544 669 MobiDBLite consensus disorder prediction 601 618 - -
Eupl02g00544 669 Gene3D - 135 285 IPR043151 -
Eupl02g00544 669 MobiDBLite consensus disorder prediction 92 113 - -
Eupl02g00544 669 MobiDBLite consensus disorder prediction 559 669 - -
Eupl02g00544 669 Pfam Agenet domain 384 457 IPR008395 -
Eupl02g00544 669 CDD BAH_plant_1 163 292 - -
Eupl02g00544 669 MobiDBLite consensus disorder prediction 619 644 - -
Eupl02g00544 669 Coils Coil 402 422 - -
Eupl02g00544 669 CDD Tudor_Agenet_AtDUF_rpt1_3 380 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00544 Eupl-Chr2 6328987 6335470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00544 392 521 PHD Transcription Factor Family AT5G58610 31.852 1.85e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00544 - - ming:122059606 939.102