Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00543 ATGAATTCTTCACTTTTTAGTCCTTTAATACTGGTTTTGATTGTTTTTCTGGGTACCCAATTTGATGTCTGTGCGAGTGATGATCGTTTGCCGGGGAATTTTATTACTTGGGACGATATGAGAGTGGAGAACTACTCTGGGAGTAGTCATTTGAAAGATGGGGGGAATCATGACGTTCTTGTTGTAGCCAAGGATGGATCAGGAGATTCGGTTACAGTTCAGGGTGCAGTCGATTTGGTTCCATATGATAATACAGAGAGGGTGAAGATTTTGATACTCCCGGGGATTTACAGAGAAAGGGTTTATGTTCCAAGAACCAAGCCTTACGTTTCATTCATTGGAAATCAAGACTCCAAGACCGTGATTACTTGGCATACTAAAGCTTCGGATAAAGATGCCAATGGGCAGGAAATTGGGACTGCGTATACAGCTACCGTTGACGTGGAATCCGATTACTTCTGTGCAACAGGCATCACTTTCGAGAATACAGTAGTTGCAGTGCCAGGAATGGTAGGGATGCAAGCTGTCGCATTAAGAACAGCAGGAGACAAATCCATGTTCCATGGAGTCAGGATTCTGGGTTCACAGGACACTCTCTTAGACCTAAGTGGAACCCACTACTTCTACCAATGCTACATTGAAGGATCTGTTGACTTCATTTTTGGTAACTCAAAATCACTCTATCAGGACTGCACTATTCATTCAACGGCGAGACGTTATGGAGCAATTGCAGCATCACATAGGAATTCGGCAGTAGAGGATACCGGGTTCTCTTTCGTAAAATGTAGAGTGAATGGGACAGGGAGAATCTACTTGGGAAGAGCCTGGGGTAGTCATTCAAGAACAGTCTATTCTTACTGTCATTTAGATGACATTATAACTCCTACTGGATGGAGTGACTGGGGATACCCATCAAGGAGAGAGACTGTGTGGTTCGGGGAATACCACAATAGAGGTAAAGGAGCCAATTCGAGGAGACGGGCACCATGGGCAAAATCTAGCTATGAGGAAGCAAGGCCTTTTCTGGATACAAATTATATAGATGGAGATCAATGGCTAAGGCTTTAA 1068 0.4373 MNSSLFSPLILVLIVFLGTQFDVCASDDRLPGNFITWDDMRVENYSGSSHLKDGGNHDVLVVAKDGSGDSVTVQGAVDLVPYDNTERVKILILPGIYRERVYVPRTKPYVSFIGNQDSKTVITWHTKASDKDANGQEIGTAYTATVDVESDYFCATGITFENTVVAVPGMVGMQAVALRTAGDKSMFHGVRILGSQDTLLDLSGTHYFYQCYIEGSVDFIFGNSKSLYQDCTIHSTARRYGAIAASHRNSAVEDTGFSFVKCRVNGTGRIYLGRAWGSHSRTVYSYCHLDDIITPTGWSDWGYPSRRETVWFGEYHNRGKGANSRRRAPWAKSSYEEARPFLDTNYIDGDQWLRL* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00543 355 SUPERFAMILY Pectin lyase-like 59 353 IPR011050 -
Eupl02g00543 355 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 52 354 - -
Eupl02g00543 355 ProSitePatterns Pectinesterase signature 2. 213 222 IPR033131 -
Eupl02g00543 355 Gene3D - 58 355 IPR012334 -
Eupl02g00543 355 Pfam Pectinesterase 60 350 IPR000070 GO:0030599|GO:0042545
Eupl02g00543 355 FunFam Pectinesterase 55 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00543 Eupl-Chr2 6326289 6328162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00543 1 307 Carbohydrate Esterase AT5G55590 56.798 3.52e-129 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00543 K01051 - ming:122092777 490.345