Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00542 ATGGGGCGCTATCGCGGTGTTCCCAATTGTGCAGACGAGGATCCGAGCCAAAGATCAAAGAGAAGAAGGGCTGCTTCAAGTGGAGAGAATTTAGAGTCTGTAGTAGCAGGTCAAGGAACAAATGAAGGGAAAAGGGCCTTATCCCACTGCAATTATTGCAATACAGACATTTCTGGAAAGATTAGTATGAAGTGTGTGAAATGTCCTAATTTTGACCTGTGTGTGGAGTGCTTTTCTGTAGGAGCTGAGGTGACACCTCACAAGAGCAATCACCCTTACAGGGTTATGGACAATTTGTCATTCCCACTTATTTGTCCAGATTGGAATGCAGATGAAGAGATACTGCTTCTAGAGGGAATTGAGATGTATGGATTAGGGAGCTGGGCAAAAGTTGCAGAACATGTTGGTACAAAGAGCAAGTCTCAATGTATTGAGCACCATACAACTGCCTACATGAACTCCCCGTGCTGTCCTCTTCCGGACATGTCTCATGTTGTCGGAACGAATAGAAAGGAGCTTCTTGCTATGGCTAAAGGGCTTGGTGAGGGCAAGAAAGGATTACTTATGTTTGGGGAGTTTACGCTGAAGGAAGAGTCTCCATTCTCTCCTTCAAGAGTCAAGACTGAAGAAGCTGCAGTAGGTCGATCACCGTGTCGCTTAACTGCAGATGTAGACTCTGCGGTTGGTTGTAGCAGCACCATTACTGTTGCAGCAGGTGCAGTTAAGAAGGCATCAAACATGGCTCATATCAAAGACGGTCTTGATGCAACCAAAGTGGAAGATTCTCAAGTAGACGGGGGCATTGGGGGAAAGAAACCTAAATCTTCTGGGAATAAGGGTCCTTCTATGTCTGAGCTCGGTGACTATAATCCCAAGAGACAGGAGTTTGATCCTGAATATGATAATGATGCTGAGCAATCACTTGCAGAGATGGAGTTCAAGGAAACTGACACCGAAGCTGAGCATGAACTGAAGCTGCGAGTGTTGCATATCTATTTAAAAAGGCTTGATGAGAGGAAACGCAGGAAAGACTTCATATTGGAAAGAAATTTACTTTATCCTGATCCATTGGAGAAGGACCTCTCCCACGAAGAAAGGGAGATATATCAACGTTTTAAGGTCTTTATGCGTTTCCATTCGAAAGAAGAGCATGAGGAATTGATTAAAACTGTTATTGAGGAGCACAGGATTTGGAAAAGAATTCAAGAACTTCAGGAAGCTCGAGCTGCTGGCTGTTGTACATCAGCTGAGGCAGATAGATATCTTGAACAGAAGAGGAAGAAGGAAGCTAAAGAAAGTGCCCCTAAATTGAAGGAAAGCACTCGGGTTGGTCCAAGCGGTAAAGTAATGCAAAGGGGGAATTGCCCCGAAGGAAAACCTGATGGTAGCCCTCGTGGAGGTGTAAAGGGGTCCGCAAAATTAGAGTCTGGTGGCGAGGATTCCTCCACAACTGCAGGGCAAGCTTCTGCAAGTTCCTTGGATGATTGGGATATCCAGGGACTTGCTGGGTCAGATCTACTATCTGAAACTGAACAACAGCTATGCCGTGAGATAAAGTTACTCCCTTCTCAATATCTTAAAATGCAGGAGGTCATATCGATGGAGATCTTCAACAGCAACGTCACCAAGAAATCCGACGCCCATCGCTTCTTCAAGGCCGACCCAAGCAAAGTGGATAGAGTTTACGAAATGCTTGTAAAGAAGGGGATTGCTAAACCGTGA 1722 0.4512 MGRYRGVPNCADEDPSQRSKRRRAASSGENLESVVAGQGTNEGKRALSHCNYCNTDISGKISMKCVKCPNFDLCVECFSVGAEVTPHKSNHPYRVMDNLSFPLICPDWNADEEILLLEGIEMYGLGSWAKVAEHVGTKSKSQCIEHHTTAYMNSPCCPLPDMSHVVGTNRKELLAMAKGLGEGKKGLLMFGEFTLKEESPFSPSRVKTEEAAVGRSPCRLTADVDSAVGCSSTITVAAGAVKKASNMAHIKDGLDATKVEDSQVDGGIGGKKPKSSGNKGPSMSELGDYNPKRQEFDPEYDNDAEQSLAEMEFKETDTEAEHELKLRVLHIYLKRLDERKRRKDFILERNLLYPDPLEKDLSHEEREIYQRFKVFMRFHSKEEHEELIKTVIEEHRIWKRIQELQEARAAGCCTSAEADRYLEQKRKKEAKESAPKLKESTRVGPSGKVMQRGNCPEGKPDGSPRGGVKGSAKLESGGEDSSTTAGQASASSLDDWDIQGLAGSDLLSETEQQLCREIKLLPSQYLKMQEVISMEIFNSNVTKKSDAHRFFKADPSKVDRVYEMLVKKGIAKP* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00542 573 Gene3D - 487 572 IPR036388 -
Eupl02g00542 573 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 146 IPR017930 -
Eupl02g00542 573 SMART zz_5 44 89 IPR000433 GO:0008270
Eupl02g00542 573 SUPERFAMILY RING/U-box 49 111 - -
Eupl02g00542 573 PIRSF Txn_adaptor_ADA2 35 573 IPR016827 GO:0003713|GO:0006357|GO:0035065
Eupl02g00542 573 MobiDBLite consensus disorder prediction 476 492 - -
Eupl02g00542 573 FunFam Transcriptional adapter 2 488 572 - -
Eupl02g00542 573 MobiDBLite consensus disorder prediction 424 438 - -
Eupl02g00542 573 ProSiteProfiles Zinc finger ZZ-type profile. 45 101 IPR000433 GO:0008270
Eupl02g00542 573 MobiDBLite consensus disorder prediction 424 492 - -
Eupl02g00542 573 Gene3D - 44 96 IPR043145 -
Eupl02g00542 573 ProSiteProfiles SWIRM domain profile. 487 573 IPR007526 GO:0005515
Eupl02g00542 573 SMART sant 104 153 IPR001005 -
Eupl02g00542 573 Pfam Myb-like DNA-binding domain 107 146 IPR001005 -
Eupl02g00542 573 CDD SANT 108 146 IPR001005 -
Eupl02g00542 573 MobiDBLite consensus disorder prediction 261 296 - -
Eupl02g00542 573 MobiDBLite consensus disorder prediction 1 37 - -
Eupl02g00542 573 CDD ZZ_ADA2 49 96 IPR041983 -
Eupl02g00542 573 ProSiteProfiles Myb-like domain profile. 108 143 IPR001005 -
Eupl02g00542 573 FunFam Transcriptional adapter 2 101 153 - -
Eupl02g00542 573 ProSiteProfiles SANT domain profile. 103 155 IPR017884 -
Eupl02g00542 573 Pfam Zinc finger, ZZ type 49 88 IPR000433 GO:0008270
Eupl02g00542 573 SUPERFAMILY Homeodomain-like 478 570 IPR009057 -
Eupl02g00542 573 ProSitePatterns Zinc finger ZZ-type signature. 50 77 IPR000433 GO:0008270
Eupl02g00542 573 Gene3D - 106 153 - -
Eupl02g00542 573 FunFam Transcriptional adapter 41 96 - -
Eupl02g00542 573 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 49 568 - -
Eupl02g00542 573 SUPERFAMILY Homeodomain-like 101 154 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00542 Eupl-Chr2 6304122 6323857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00542 1 570 EF-hand Containing Proteins AT3G07740 48.973 2.25e-169 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl02g00542 Myb_DNA-binding 2.4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00542 K11314 - ming:122060227 834.328