Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00528 ATGAGTTTTTTGGCCATCGTTGGAGTTTTTCTCAAGCTTCCAAGGCTTTTCTTGAAGATATGCCAGTGGGTTTTGGTTAGGATGGCTTTGAATTGCAAACTATCAGCTTGTAAAGGCAGATTATCAGCTAATTCAAAGCCAAAGAAGCTGAAGGAGCAATTGCAGAGACCTAGTGGTGGTGGTTGGAAGTGGGGGAGAAAGCTTCTGGTTCTGTGGGTTTTGGGTGGCGTCGTTTGGTCTATGTGGGTTTTCTTCCCTGGTTTGAACGATGGAGTTTCAAGGAGGAAGGAGAAGATTTCAGACTTGTGGGAAGAGAAAGCTCGAATTTTGCAAGAGCAGTTCAATGTGAGCAAGAATCAACTTCATGCCTTGGCCTCTCTGCTCTCGAAATCAGATCAGAAAGTACCCTTGGAATGTATGGAGAAACCAGGGATTGAGATGCCACAAAGTAATGTCATTGCCTGTGCTCTGAAATTGCTGTGTTCAGAAAGGGAGAAGTTTGAAAAGCAGTGTGGGTGGGTGACAGAGAACATAGAAGCGAAAGATCAATGCCCTGTTCGAGATGAGTACGTTCCTGGGAAGCTTGGCCCACAATTTGTGATGGAGGGACCTGGGCCAGTTGTTATATCTCATGATGCCATATCTTCTACTTCACCTGGTGACCAGACCTGTGGAAAGAACATCTTACAAACGAGGGTGCTTGGCAACTGCAAACAAAAGCATTGTGAGAGACTCCTTATCTGTTTCCTGAATTTATGTTGGTGGGTCCTTGTTGGTATGATGGTAAGGTGGAAGGTCTCTGGTTTTCATCGAAGATTGTGGGTAAACCAGAAGCAGAAGCAGAAGCAGGTTCAGCAGCAGCCACAGACACATCTGCAGCTACTGCAGAAGCAGCAACAGCAGTCCCAGAGCAATTCTAAAGGCAGCGGGAAGTGGAGGAGAAAGCTCCTAATTCTGTTTCTGTTGGCTGGGGTGATTGGGTCTATTTGGTTGTTTTGGTTCATGTGCAAGAATGCAGTTTTGTGGAGGACAGAGATGCTTGCCAACATGTGTGATGAGCGGGCCCGTATGTTGCAAGATCAGTTCAACGTCAGCATGAACCATGTCCATGCCTTGGCCATTCTTGTCTCGACCTTTCACCATGGCAAGCTACGTTCCGCCATTGATCAGAAAACATTTGCAGAATATACAGAAAGGACAGCTTTTGAAAGGCCACTTACTAGTGGTGTTGCTTATGCTTTGAAAGTTCTGCATTCTGAGAGAGAGCAGTTTGAGAAGCAGCATGGATGGGCAATAAAGAAAATGGAGACAGAAGACCAGTCTCCAGTTCAAGATTACATTCCTGAGAAGCTAGACCCTTCACCCATCCAAGATGAATATGCACCCGTTATATTCTCCCAAGAAACGGTCTCTCATATTGTCTCTATAGACATGATGTCTGGAAAGGAAGACCGTGAGAACATCTTGAGGGCAAGGGCATCTGGAAAGGGAGTCCTGACCTCTCCTTTCAAGCTACTAAAATCCAATCACCTGGGAGTGGTACTCACGTTCGCTGTGTACAACACTGACCTCCCCCCAGATGCTACATCTGAGCAACGTTATGAAGCAACCGAGGGGTATCTGGGTGCATCTTATGATGTCCCATCATTAGTGGAGAAGCTTCTGCACCAGCTTGCCAGCAAACAAACAATTGTTGTGAATGTCTATGACACAACTAATAGTTCTGCACCCATCAACATGTATGGTCCTAATATAACTGATACAGGCCTGTTGCACATTAGCAACCTTGATTTCGGGGATCCAGTTCGGAAGCACAAGATGCACTGCAGATTTAAGCAGCAGCCTCCCGCACCTTGGACGGCAATAATGTCATCTGTGGGGGTCCTAGTGATCACATTTCTCGTTGGCCATATCTTTCATGCAGCAATAAACAGAATTGCAGAAGTGGAGGGTGACTATCGTGAGATGATGGAGCTAAAAGTCCGAGCAGAAGCTGCCGATGTGGCTAAATCCCAGTTCCTGGCCACCGTTTCCCATGAGATCAGGACTCCAATGAATGGTGTTTTAGGTATGCTGAAGATGTTGATGGATACAGATCTTGATGCAACTCAACAGGATTACGCATCGACTGCTCATGCTAGTGGGAAAGATCTAATTTCGCTAATTAATGAGGTCCTTGATCAGGCTAAGATAGAATCAGGAAGGGTTGAGCTTGAAGCTGTCTCATTTGATCCGCGTGCTGTCCTTGATAACGTGTTATCGCTTTTCTCTGGCAAATCGCATGACAAAGGCATTGAGTTGGCCGTTTACGTATCCGATCAGGTGCCTGAAGTTGTCACTGGGGACCCTGGGCGGTTCCGGCAGATAATTACAAATCTTGTTGGAAATTCAGTCAAGTTTACTAAGGAAGGGCATATATTTGTCTCAGTACATCTAGCAGACGAAGTGAGGAGTCCAGCGGAAGTGAGGGACCGAGTGCTGAAACAACACCTTGAGTTAATTAAAAACAGGGAAGACACATCTTATAATACGTTGAGTGGGTTGCCTATAGTTGACAGGTGGAAGAGCTGGGAGAGTTTGAAGATGTTAAGTGGTGTAAATTCAACAGAAGTAACCGAGATGATTAGATTGCTAGTAACGGTCGAGGACACTGGTGTGGGAATACCTCAAGATGCACAGTGCCGTATCTTCATGCCTTTCATGCAGGCTGACAGTTCTACTTCACGAACATATGGTGGTACTGGTATAGGCTTAAGCATCAGCAGGTGTTTAGTGGATCTGATGGGTGGGGAGTTTGGGTTTGTGAGCGAACCTGGGACTGGTAGTACCTTCACATTTACTGCAGGTTTCACTAAAGGAGAAACGAGATCGCTGGATACAAAGTGGCATCAGTTCGAATCAATAGTGCCAGAGTTCCAGGAATTGAGAGCATTGGTTGTTGATGGGAGAAGTATTCGTGCTGAGGTCACAAGGTATCATCTTCGGAGACTTGGGATATCCGTCGATATCGCGCTCAGTCTGAAATGTGCATGTTCTTATATATCAAATACTTTCAACAAAAGTGGGACAGCGCATTTAGACATGGTGCTTGTTGACAAAGACGCTTGGGGTGAGGGGACAGGTCTTGCGCTCCCTCGTCTGTTCAAAGAGCTCAACCAAAATGGGATAGGGAAGCACTTGGGAAACCATCCAAAGATATTCCTCCTGGCTCCCTCCATAAGCTCTACCGAGATTAATGAGTTCAAATCACTTGGTTGCATAGATAATATAATAATGAAGCCCCTCCGGTTAAGTATGATGGCCGCGTGCTTCCAGCAAGCCCTTGGTGTAGGGACCAAGATGCACAAGGATAGAGGGAAACCGTCAACCCTTCAGAGTCTTCTAAGTGGAAAACAAATATTGGTTGTGGATGACAATGTTGTTAACCGTAGAGTGGCTGAGGGTGCACTAAGGAAGTATGGAGCCACTGTTACATGTGTCGATAGTGGGAAGGCTGCTCTAGGGATGCTTCAGCCACCCCACAAGTTCGATGCTTGCTTTATGGATCTCCAAATGCCGGAGATGGATGGGTTTGAAGCTACAAGAAAGATCCGCTGTACAGAGAATAAGATTAATGAGCAGATTAAATTGGGGGAAGCATCTATTGAGAAGTTTGGGAATGTGGCGCATTGGCATACACCGATACTAGCCATGACGGCTGATGTGATTCAGGGAACCCATGAAGAGTGCATGAGATGTGGGATGGATGATTATGTATCGAAGCCGTTTGAAGAAGAGCAGCTCTACTCTGCAGTGGCGCATTTCTTCAAGTCTGATTGTTAA 3822 0.46 MSFLAIVGVFLKLPRLFLKICQWVLVRMALNCKLSACKGRLSANSKPKKLKEQLQRPSGGGWKWGRKLLVLWVLGGVVWSMWVFFPGLNDGVSRRKEKISDLWEEKARILQEQFNVSKNQLHALASLLSKSDQKVPLECMEKPGIEMPQSNVIACALKLLCSEREKFEKQCGWVTENIEAKDQCPVRDEYVPGKLGPQFVMEGPGPVVISHDAISSTSPGDQTCGKNILQTRVLGNCKQKHCERLLICFLNLCWWVLVGMMVRWKVSGFHRRLWVNQKQKQKQVQQQPQTHLQLLQKQQQQSQSNSKGSGKWRRKLLILFLLAGVIGSIWLFWFMCKNAVLWRTEMLANMCDERARMLQDQFNVSMNHVHALAILVSTFHHGKLRSAIDQKTFAEYTERTAFERPLTSGVAYALKVLHSEREQFEKQHGWAIKKMETEDQSPVQDYIPEKLDPSPIQDEYAPVIFSQETVSHIVSIDMMSGKEDRENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVYNTDLPPDATSEQRYEATEGYLGASYDVPSLVEKLLHQLASKQTIVVNVYDTTNSSAPINMYGPNITDTGLLHISNLDFGDPVRKHKMHCRFKQQPPAPWTAIMSSVGVLVITFLVGHIFHAAINRIAEVEGDYREMMELKVRAEAADVAKSQFLATVSHEIRTPMNGVLGMLKMLMDTDLDATQQDYASTAHASGKDLISLINEVLDQAKIESGRVELEAVSFDPRAVLDNVLSLFSGKSHDKGIELAVYVSDQVPEVVTGDPGRFRQIITNLVGNSVKFTKEGHIFVSVHLADEVRSPAEVRDRVLKQHLELIKNREDTSYNTLSGLPIVDRWKSWESLKMLSGVNSTEVTEMIRLLVTVEDTGVGIPQDAQCRIFMPFMQADSSTSRTYGGTGIGLSISRCLVDLMGGEFGFVSEPGTGSTFTFTAGFTKGETRSLDTKWHQFESIVPEFQELRALVVDGRSIRAEVTRYHLRRLGISVDIALSLKCACSYISNTFNKSGTAHLDMVLVDKDAWGEGTGLALPRLFKELNQNGIGKHLGNHPKIFLLAPSISSTEINEFKSLGCIDNIIMKPLRLSMMAACFQQALGVGTKMHKDRGKPSTLQSLLSGKQILVVDDNVVNRRVAEGALRKYGATVTCVDSGKAALGMLQPPHKFDACFMDLQMPEMDGFEATRKIRCTENKINEQIKLGEASIEKFGNVAHWHTPILAMTADVIQGTHEECMRCGMDDYVSKPFEEEQLYSAVAHFFKSDC* 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00528 1273 FunFam Histidine kinase 3 1126 1273 - -
Eupl02g00528 1273 PRINTS Bacterial sensor protein C-terminal signature 936 949 IPR004358 GO:0016310|GO:0016772
Eupl02g00528 1273 PRINTS Bacterial sensor protein C-terminal signature 877 891 IPR004358 GO:0016310|GO:0016772
Eupl02g00528 1273 PRINTS Bacterial sensor protein C-terminal signature 912 930 IPR004358 GO:0016310|GO:0016772
Eupl02g00528 1273 PRINTS Bacterial sensor protein C-terminal signature 895 905 IPR004358 GO:0016310|GO:0016772
Eupl02g00528 1273 ProSiteProfiles Response regulatory domain profile. 1132 1269 IPR001789 GO:0000160
Eupl02g00528 1273 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 723 947 IPR036890 -
Eupl02g00528 1273 FunFam Histidine kinase 4 641 732 - -
Eupl02g00528 1273 Pfam CHASE domain 387 581 IPR006189 -
Eupl02g00528 1273 PANTHER TWO-COMPONENT HISTIDINE KINASE 275 1262 - -
Eupl02g00528 1273 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 781 949 IPR003594 -
Eupl02g00528 1273 SUPERFAMILY CheY-like 971 1109 IPR011006 -
Eupl02g00528 1273 CDD HATPase_EvgS-ArcB-TorS-like 786 948 - -
Eupl02g00528 1273 Gene3D - 733 953 IPR036890 -
Eupl02g00528 1273 SUPERFAMILY CheY-like 1129 1268 IPR011006 -
Eupl02g00528 1273 CDD REC_hyHK_CKI1_RcsC-like 1133 1265 - -
Eupl02g00528 1273 FunFam Histidine kinase 4 388 615 - -
Eupl02g00528 1273 Pfam Response regulator receiver domain 1133 1202 IPR001789 GO:0000160
Eupl02g00528 1273 Gene3D - 969 1111 - -
Eupl02g00528 1273 Gene3D - 1126 1272 - -
Eupl02g00528 1273 SMART HisKA_10 669 734 IPR003661 GO:0000155|GO:0007165
Eupl02g00528 1273 ProSiteProfiles Response regulatory domain profile. 976 1108 IPR001789 GO:0000160
Eupl02g00528 1273 Gene3D CHASE domain 388 615 IPR042240 -
Eupl02g00528 1273 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 654 735 IPR036097 GO:0000155|GO:0007165
Eupl02g00528 1273 ProSiteProfiles Histidine kinase domain profile. 676 952 IPR005467 -
Eupl02g00528 1273 ProSiteProfiles CHASE domain profile. 384 608 IPR006189 -
Eupl02g00528 1273 SMART CHASE_2 384 583 IPR006189 -
Eupl02g00528 1273 Gene3D - 637 732 - -
Eupl02g00528 1273 Pfam His Kinase A (phospho-acceptor) domain 669 734 IPR003661 GO:0000155|GO:0007165
Eupl02g00528 1273 CDD HisKA 669 730 IPR003661 GO:0000155|GO:0007165
Eupl02g00528 1273 SMART REC_2 1131 1265 IPR001789 GO:0000160
Eupl02g00528 1273 SMART HKATPase_4 781 952 IPR003594 -
Eupl02g00528 1273 Gene3D - 89 136 - -
Eupl02g00528 1273 Gene3D - 335 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00528 Eupl-Chr2 6120279 6133517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00528 17 235 Miscellaneous Gene Families AT5G35750 33.333 1.29e-30 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl02g00528 CHASE 6.7e-36 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00528 K14489 - nnu:104594216 1740.32