Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00526 ATGGGAACATCTTCCGGCGCTAACTTCCACCACCAACCTCCGCCCAAAATGCTGCCTCCACGGCAGCAACCACGATCTGCAGGATTACAGACATCCCTATCCCTAGTTTCATCAGACGCTTGTGGGTCCCCAGATCTTCAGGAACCCGGGTCAAATTCCGAGCAGGTTCGCGAGTCCCCATCAGAGAGTGCCAGTTCACGTGAAACCTGGCCTGCTTGTGATGCCAGTATGGGAAAGAAGCCGGAGAATGAGAAAGGAGGGAATGATTGCCCTGAACAGTCGGTTATTCGCCGGGTTTCTAGTTCAGATAAGATGTCTCTTCGGGATGTAGCTAGAGAAAGAGTGGAGGTAATCTTTGAACGGATGCACCTTCTGCCAGATGAGCTTCTAGAAGAGCTCAAGACTGATCTTCGGGTTATTCTTGAAGGGACTGGTGGTTCTCAGCATAGAGAAGAATTTTTGCTTTTGCAGAAACTTGTTCAGGGTAGAGCTGATTTGACAGCTAAAACCCTGATTAGAGCACACCGCGTACAGCTGGAAATCCTTGTTGCGATAAATACAGGAATTCAGGCATTTTTGCATCCGACTATCAGTCTCTCTCAGACTTCCCTCATTGAGGTTTTTGTGTACAAGAGATGCAGAAATATAGCATGCCAAAACCAGCTTCCAGCCGAAGATTGTACCTGTGAAATATGTACCAATAGAAATGGTTTCTGCAATCTTTGCATGTGTGTGATCTGTAACAAGTTTGATTTCGAGGTGAACACGTGCCGTTGGGTTGGTTGTGATTTGTGCTCTCATTGGACTCACACGGATTGTGCAATTCGCGAAGGACAAATCAGTATGGGCCCTTGTGTTAAAAGTGGTGCAGGCCCTGCTGAGATGCTTTTCAAGTGCCGAGCTTGCAATAGGACGTCTGAGTTGTTAGGGTGGGTTAAAGATGTGTTCCAAAACTGTGCGCCAGGTTGGGACCGGGAAGCCCTGATGAGGGAGCTCGATTTTGTTAGTAGGATCTTCCGTGGAAGTGAGGATCAGAGAGGGAGGAAGCTGTTTTGGAAGTGTGAGGATCTTATAGAAAAGATGAAGGCCGGAGTTGCGGAGTCGACAGCTTGCAAAGTGATGCTGCTATTCTTCCAAGAGCTTGAAGTTGACCCCACGAAGAACCCTGAAATTGAAGAAGGTGGGCATTTAATAGCCCCGCAAGAGGCTTGCAATCGGATTGCAGAAGTGGTGCAGGAAACCATCAGAAAAATGGAAATGGTGGCTGAGGAGAAGATGCGGACATTCAAGAAAGCTCGTCTGGCTCTTGAGGCTTGTGATCGAGAGCTTGAGGACAAGGCCAGGGAGGTAGCGGAGCTAAAGATGGAGAGACAGAGGAAGAAACAACAGATCGATGAGCTAGAGAGCATTGTGAGGCTGAAGCAGGCTGAAGCTGACATGTTCCAGCTCAAGGCCAGTGAGGCAAGGCGAGAGGCTGAGAGGCTTCAGAGGATCGTGCTCGCCAAGTCGGAGAAGGCGGAGGAGGAATATGCTAGCAGGTACCTGAAACAACGGTTGAATGAGGCTGAGCTTGAGAAGCAGTATCTGTTCGAGAAGATAAAGCTTCAGGAGAGTTCACGGGCATCGCTGGCCAATGGTGGAGGAAGTGATCCTTCCCAGATGCTGATGCTATGCAAGATCCAGGACTTGCTCAAGAATGTGTACAATGTGCCTCCAAAGACAGAAGGCCAGGCAAATGACCATCATTCTCTTGGCGCAGTTCCTTGA 1767 0.4907 MGTSSGANFHHQPPPKMLPPRQQPRSAGLQTSLSLVSSDACGSPDLQEPGSNSEQVRESPSESASSRETWPACDASMGKKPENEKGGNDCPEQSVIRRVSSSDKMSLRDVARERVEVIFERMHLLPDELLEELKTDLRVILEGTGGSQHREEFLLLQKLVQGRADLTAKTLIRAHRVQLEILVAINTGIQAFLHPTISLSQTSLIEVFVYKRCRNIACQNQLPAEDCTCEICTNRNGFCNLCMCVICNKFDFEVNTCRWVGCDLCSHWTHTDCAIREGQISMGPCVKSGAGPAEMLFKCRACNRTSELLGWVKDVFQNCAPGWDREALMRELDFVSRIFRGSEDQRGRKLFWKCEDLIEKMKAGVAESTACKVMLLFFQELEVDPTKNPEIEEGGHLIAPQEACNRIAEVVQETIRKMEMVAEEKMRTFKKARLALEACDRELEDKAREVAELKMERQRKKQQIDELESIVRLKQAEADMFQLKASEARREAERLQRIVLAKSEKAEEEYASRYLKQRLNEAELEKQYLFEKIKLQESSRASLANGGGSDPSQMLMLCKIQDLLKNVYNVPPKTEGQANDHHSLGAVP* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00526 588 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 52 567 IPR004082 -
Eupl02g00526 588 Pfam PHD - plant homeodomain finger protein 213 336 IPR032881 -
Eupl02g00526 588 PIRSF UCP025218 17 574 - -
Eupl02g00526 588 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 323 342 IPR004082 -
Eupl02g00526 588 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 204 225 IPR004082 -
Eupl02g00526 588 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 250 270 IPR004082 -
Eupl02g00526 588 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 504 526 IPR004082 -
Eupl02g00526 588 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 163 178 IPR004082 -
Eupl02g00526 588 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 178 193 IPR004082 -
Eupl02g00526 588 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 121 143 IPR004082 -
Eupl02g00526 588 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 465 485 IPR004082 -
Eupl02g00526 588 SMART PHD_3 243 303 IPR001965 -
Eupl02g00526 588 MobiDBLite consensus disorder prediction 1 103 - -
Eupl02g00526 588 CDD PHD_OBE1_like 243 302 IPR047578 -
Eupl02g00526 588 MobiDBLite consensus disorder prediction 24 70 - -
Eupl02g00526 588 Pfam Coiled-coil region of Oberon 430 564 IPR032535 -
Eupl02g00526 588 Coils Coil 429 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00526 Eupl-Chr2 6100099 6107114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00526 213 315 PHD Gene Family AT5G57380 29.808 1.26e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00526 - - ming:122066467 1008.05