Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00517 ATGGGTATAGATTGGGAGCAAATGCTCCATCAATACGAAAATGTTATTGCTTGTGAGAGAGAGGCTTTACAAATAAGAGCCACGGTCAAGCTCGGACAGCTCTCAAATGATGTGCCGGATAATGTATTAGCACGCACCGTGCCAATCCTCGTTGAGCTTCTGGGAAGCCCTTTAAACGATTCAAATCCATCCATTCAAGAAGCTGCTGTTTATTGCTTGAATCGTCTTGCCCGTCAAGGCGATGGTGAGTTGGCTATTATCATTGGCCAATCTGGTGCTGTTCCACTACTCTTGAGGTTATTGCCATTGTCTGAAGGTAGATTTCGGAGAGTTTCCATAAAATGTCTTTGGAGAATTGTTAGTTTCGGTAATCTTAATCGTGTAATTGTTGTTAGAAATGGTGGTTTGGAAGTTGTTATCAATCTGTTTGGTTTGTGTACTGACGATACAAGGCGATTTTTGTTGGAGATTTTGAGTGCGTTGGCGTTGTTGAGAGAGGTGAGGCGGGTTATTTTTAATTTTGGGGGCCTTCACTTGCTTGTTGAATCTGCTAGGTGTGGCAGCATGGTCTCTAGAGCCAGAGCTGCTCAGGCGATCGGGTTACTTGGGGTAACAAGAAGAGTGAGGCAGATGCTTGTTGACTTGGGTGTTTTACGTGTGCTCGTCGATTTGTTGCGGGATGGAGATATGTCTACGAGGTTGGTAGCTGGTAATGCTCTTGGTATAATTGCATCGCATGTTGATTATCTTAGGCCTGTTGCTCAAGCAGGGGCCATTCCCTTATATGCAGAGCTTCTCCAGGGACCAGAACCCCTGGGTAAAGAAATTGCGGAGGATGTGTTTTGTATCTTATCTGTTGCAGAAGTGAATGCAGTGTCAATTGCTGAACACTTAGTGAGGATTCTTCGAGGTGATAATGATGAAGCGAAAGCAGCAGCTGCAGATGTTCTGTGGGATCTCTCGGGTTACAAGCACTCGGTATCTATTGTCCGAAATTCTGGTGCAATTCCAGTACTGGTTGAGCTTTTGCGTGATGGGAATGGTGATGTTAGAGAGAAGGTGTCTGGAGCTGTTGCCCAATTGAGTTATGATAAGACAGATCGAGGAGCTCTGGCTGATGCGGGGGCCATTCCACTCCTCATGAACTTGTTGCAGGATGAATCGGAGGAGCTGAAGGATAATGCAGCTGAAGCCCTGATCAATTTCTCGGAAGACCCATTACTACGTGACAGAGTATCAGAAGCATTCGATATCCCATCATTCCAGAATATACAGAATAGACTTGTCCGGATTCGCGCATCTGATGAACATATGGTTAGATCTTTGAGGCGGATGAGTATTGAGCAGTTCACATGGGACCCAGAACTTGCTTGA 1374 0.4541 MGIDWEQMLHQYENVIACEREALQIRATVKLGQLSNDVPDNVLARTVPILVELLGSPLNDSNPSIQEAAVYCLNRLARQGDGELAIIIGQSGAVPLLLRLLPLSEGRFRRVSIKCLWRIVSFGNLNRVIVVRNGGLEVVINLFGLCTDDTRRFLLEILSALALLREVRRVIFNFGGLHLLVESARCGSMVSRARAAQAIGLLGVTRRVRQMLVDLGVLRVLVDLLRDGDMSTRLVAGNALGIIASHVDYLRPVAQAGAIPLYAELLQGPEPLGKEIAEDVFCILSVAEVNAVSIAEHLVRILRGDNDEAKAAAADVLWDLSGYKHSVSIVRNSGAIPVLVELLRDGNGDVREKVSGAVAQLSYDKTDRGALADAGAIPLLMNLLQDESEELKDNAAEALINFSEDPLLRDRVSEAFDIPSFQNIQNRLVRIRASDEHMVRSLRRMSIEQFTWDPELA* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00517 457 SUPERFAMILY ARM repeat 4 320 IPR016024 -
Eupl02g00517 457 ProSiteProfiles HEAT repeat profile. 376 404 IPR021133 -
Eupl02g00517 457 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 4 ARMC4 298 415 - -
Eupl02g00517 457 SUPERFAMILY ARM repeat 294 414 IPR016024 -
Eupl02g00517 457 Pfam Armadillo/beta-catenin-like repeat 208 244 IPR000225 GO:0005515
Eupl02g00517 457 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 334 376 IPR000225 GO:0005515
Eupl02g00517 457 Gene3D - 4 152 IPR011989 -
Eupl02g00517 457 Gene3D - 153 289 IPR011989 -
Eupl02g00517 457 Gene3D - 290 442 IPR011989 -
Eupl02g00517 457 Pfam HEAT repeats 296 399 - -
Eupl02g00517 457 Coils Coil 381 401 - -
Eupl02g00517 457 SMART arm_5 364 404 IPR000225 GO:0005515
Eupl02g00517 457 SMART arm_5 35 78 IPR000225 GO:0005515
Eupl02g00517 457 SMART arm_5 81 121 IPR000225 GO:0005515
Eupl02g00517 457 SMART arm_5 205 245 IPR000225 GO:0005515
Eupl02g00517 457 SMART arm_5 323 363 IPR000225 GO:0005515
Eupl02g00517 457 SMART arm_5 279 322 IPR000225 GO:0005515
Eupl02g00517 457 SMART arm_5 123 163 IPR000225 GO:0005515
Eupl02g00517 457 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 45 87 IPR000225 GO:0005515
Eupl02g00517 457 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 375 403 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00517 218 419 U-box Gene Family AT2G23140 30.000 2.07e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00517 - - ming:122090834 660.988