Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00514 ATGAGTTCTCAGTTTCGGTCTGAGAGTGATTCTTCCGGAAAGGACTATCAGTATTACCCTGGGTTTCAAGTGGCTGGCTTAAGTCATGTAGTAGGTTATTCTTCGATGCAAGCTTCTCAGAAGCCTGGAAGTTCGGGTGGGTCCAACAGTTTGTATTACCAACCCATTCAAGAGGTCGAATCCTATTGCTTGCCTCAGAATTTCCGAACTTCAGACCACCAACTATGCTCTGATGAGAGCAGCCAAGGAACCCATTTTTCCGTGCAGACTTCTCCTGAACAGTACTGCACCTTGGAGTCATCCTCGGCAACCGGCGGTGGTTACACGGTTTACAATTCCCCATCTACCCTCAGTTTTTCACCTAATGGGAGCCCTGTATCACAGCAAGAGTCTCAGTCATACCCCATGAACCTACATCATTCCCCTGACAACACCTATGGATCCTCTATAAGTGCGTCCTGCATAACAGGCAGTGTTGACCTGAGGAACAAGCTGAGAGAATTGGAAACTGCGATGCTTGGACCTGATTCAGATATAGTTGACAGCTTCGATGACACCTTCCAGGGTGGAGCCAACCAAGCCTCACCGCCAGAGCCAGAGAATAGGGAACAAATGATGGAGATGATCCCTAGAGGGGACTTGAAACAGATGCTCATTGCCTGTGCAGAAGCTGTATCAGATAATGATCATGTGATGGTGGATCTGTTGATGGCTGAGTTAAGGCAGATGGTGTCAGTCTCTGGAGAGCCAATCCAGCGGTTGGGTGCCTACATGTTGGAAGGGCTTGTTGCGAAGTTGGCCTCCTCAGGGAGTTCCATCTACAAAGCCCTTAAGTGCAATGAACCTGCAAGTGCTGAACTCCTCTCGTACATGCACATCCTCTATGAGGTCTGCCCATACTTCAAGTTTGGATACATGTCTGCAAATGGTGCCATAGCAGAAGCTGTGAAGGATGCAAAACGAATCCACATCATTGACTTCCAGATTGCACAAGGCAGCCAGTGGATCACCTTGATCCAGGCTCTTGCGTCTCGCTCTGGTGGGCCCCCGTACATCCGTATCACGGGTGTCGATGATTCAAATTCAGCTTATGCCCGAGGTGGTGGACTTCAGATCGTGGGGCAGAAGCTATCGAAACTTGCTGAGTCATATAAGGTGCCCTTTGAGTTCCATGCCGCAGCCATGTCTGGTTGTGATGTTGAGCTCCAGAATCTTGGAATTCGATATGGGGAGGCTCTCGCTGTGAATTTCCCATATGTGCTGCACCACATGCCAGACGAGAGCGTGAGCACTCAGAACCACCGGGATAGGTTGTTGAGATTGATTAAGAGCTTGTCGCCCATGGTGGTGACCCTCGTAGAGCAAGAATCTAACACCAACACCGCCCCATTCTTGCCCCGGTTTGTTGAGACGCTGAACTATTATACAGCCATGTTCGAGTCGATAGATGTGACCCTCCCAAGGGACCACAAGGAACGGATCAATGTAGAGCAGCACTGCCTAGCCAGGGATGTGGTCAATATCATAGCATGTGAGGGGGCTGAGAGGGTGGAACGACATGAGCTTCTTGGGAAGTGGAGGTCACGGTTCTCCATGGCTGGGTTTACTCCATACCCATTGAACTCAGTGGTCAATGCCACCATCAAGAATTTGTTAGAGCGATACAGCAAGAACTACAGACTTGAAGAGAGAGACGGAGCTCTCTATCTTGGCTGGAAGAACAGGGATTTGGTCGTCTCTTGTGCATGGAGATGA 1755 0.4969 MSSQFRSESDSSGKDYQYYPGFQVAGLSHVVGYSSMQASQKPGSSGGSNSLYYQPIQEVESYCLPQNFRTSDHQLCSDESSQGTHFSVQTSPEQYCTLESSSATGGGYTVYNSPSTLSFSPNGSPVSQQESQSYPMNLHHSPDNTYGSSISASCITGSVDLRNKLRELETAMLGPDSDIVDSFDDTFQGGANQASPPEPENREQMMEMIPRGDLKQMLIACAEAVSDNDHVMVDLLMAELRQMVSVSGEPIQRLGAYMLEGLVAKLASSGSSIYKALKCNEPASAELLSYMHILYEVCPYFKFGYMSANGAIAEAVKDAKRIHIIDFQIAQGSQWITLIQALASRSGGPPYIRITGVDDSNSAYARGGGLQIVGQKLSKLAESYKVPFEFHAAAMSGCDVELQNLGIRYGEALAVNFPYVLHHMPDESVSTQNHRDRLLRLIKSLSPMVVTLVEQESNTNTAPFLPRFVETLNYYTAMFESIDVTLPRDHKERINVEQHCLARDVVNIIACEGAERVERHELLGKWRSRFSMAGFTPYPLNSVVNATIKNLLERYSKNYRLEERDGALYLGWKNRDLVVSCAWR* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00514 584 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 151 578 IPR005202 -
Eupl02g00514 584 ProSiteProfiles GRAS family profile. 205 584 IPR005202 -
Eupl02g00514 584 Pfam GRAS domain family 214 584 IPR005202 -
Eupl02g00514 584 MobiDBLite consensus disorder prediction 116 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00514 Eupl-Chr2 5953238 5959661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00514 51 584 GRAS Transcription Factor Family AT5G48150 61.825 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl02g00514 GRAS 2.3e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00514 - - nnu:104606588 893.264