Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00512 ATGGAGGAAAATGTGAAATCCGAACTTCAAGTTTCTCAGAGAAGAGATCGTGAAGGTGAAACCAGAGCTTCTGAGCTTCGATTCGAGAGTTTTAATGGCGGAAACTGTGTGAGTGCCGGTTCTGTTCAGGTTTCAAACGGGGAAGATTCGGAAATGAACGATTTTTACGTAAAGTCGGATTCTAGGGTTTTCTTTGGTTCCGGATCTTATGCTGCAAGATATAAGTTGATGTCGCCTGCGAGACTTTCGATCTCGCGATCGCCGTGTATAACCATCCCTCCTGGTTTGAGCCCGACGACGCTGCTTGATTCTCCTGTTCTTCTCTCGAATATGAAGGCCGAACCTTCTCCAACTACTGGTACCTTCACCAAGCCTCAAATCATGCATGACACTGTTGATCCGGACCCATTCCCTTCTCCAAAGGATATTTCCAGTAGCAGTACCTATGATGAAAGAAGCTCTCACAACTTTGAATTTAAACCTCACATTGGCTCAAGCTCAGGGTCAGGCCTCTCGTCATTGGGACCTTTGGCTTCTGCAGGCTCGAACTACCAGCAATGCGAGCCATTTGCACAAGTTCAAAGTCAATGCCAGACTCAGACATTTGCATCCTCACCATCAGTTAAAAATGAGAAGATGGCAGCATCCTCACATGAATTGACTCTACCAGTAACAGCTCCAAACCCACCAGTTTACATGGGTTCTCCAAGAGCTAGTGTACCTGCTGTAGTTGCTTCTGACGAGTCATGGCAGAGACAGGGCTCGGACAGCGGGGTCCAAGCAACACAAGCCAATCATAAAGGAACTAGTCCTCTAATAGCAGCTGAGAGATCATCGGAAGATGGATATAACTGGCGAAAATACGGGCAGAAACACGTGAAAGGCAGTGAATTTCCACGGAGCTATTACAAATGTACACATCCTAACTGCCAAGTGAAAAAGCAACTGGAACGCTCTTATGATGGGCAGATTACAGAGATAATCTATAAGGGAAAGCATGATCATCCTAAACCTCAGCCTAGTCGTCGAATGGCAGTTGGTACAATTCTGTCTATCCAGGAAGAAAGATCTAATAAGTTTTCTTTGTTAAACAGCACAGAAGACAAGTCATCAAATGCACATGGCCAAACATCTTATCATATCGAGCCAAATGGTACCCCTGAGCTTTCTCCTGTCACAGCAAGTGATGATGTAGAAGGTGAAGGTGCACAATTGAATAGGATTGGCGATGAGATTGAAGATGACGATGATCCAGAGTCTAAGCGCAGGAAAAAAGAAATTGATGGTGTAGATGTTACTCCAATGGGTAAAGCGACTCGTGAACCACGAGTTGTTGTTCAAACTCTAAGTGAGGTTGATATACTGGATGATGGGTACCGCTGGCGCAAATATGGGCAGAAAGTGGTGAAAGGGAATCCTAATCCGAGGAGTTACTACAAATGCACAAATGCTGGATGCCCAGTTAGGAAACACGTGGAGAGGGCATCACACGATCTGAAAGCAGTTATAACCACATACGAGGGAAAACATAATCACGATGTACCCGCTGCAAGGACTAGTAGCCATGACACAGCAGGGCATGCAATATATAATACAGCTTCGAATGGCATTTTGAGGACTAGATTAGAAGAAAGTGACACAATTAGCCTTGATCTCGGGGTTGGGATCAGCTCGAGTCCTGAAAATATATCAAATGAGAAGCTGCAAACACCGGATGCAGAACCTGTCCAAAGCCAATCCTACATTGCTGGTCCTGATTATAGTAAGGCGATTCAAGCAACCCCAGTTTCAGCATACAATGGTGGTTCAAACGATGGTGCAGATCGGTATGGATCTAGGGAAGACCGAGTAGAAAGCTTTAGCTTCAAGATACCACCTTTAAACCATTCCTCTAACCCATACCGGCAGAACATGGGAAGATTAATACTGGGTCCATAA 1938 0.451 MEENVKSELQVSQRRDREGETRASELRFESFNGGNCVSAGSVQVSNGEDSEMNDFYVKSDSRVFFGSGSYAARYKLMSPARLSISRSPCITIPPGLSPTTLLDSPVLLSNMKAEPSPTTGTFTKPQIMHDTVDPDPFPSPKDISSSSTYDERSSHNFEFKPHIGSSSGSGLSSLGPLASAGSNYQQCEPFAQVQSQCQTQTFASSPSVKNEKMAASSHELTLPVTAPNPPVYMGSPRASVPAVVASDESWQRQGSDSGVQATQANHKGTSPLIAAERSSEDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCQVKKQLERSYDGQITEIIYKGKHDHPKPQPSRRMAVGTILSIQEERSNKFSLLNSTEDKSSNAHGQTSYHIEPNGTPELSPVTASDDVEGEGAQLNRIGDEIEDDDDPESKRRKKEIDGVDVTPMGKATREPRVVVQTLSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCPVRKHVERASHDLKAVITTYEGKHNHDVPAARTSSHDTAGHAIYNTASNGILRTRLEESDTISLDLGVGISSSPENISNEKLQTPDAEPVQSQSYIAGPDYSKAIQATPVSAYNGGSNDGADRYGSREDRVESFSFKIPPLNHSSNPYRQNMGRLILGP* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00512 645 SMART WRKY_cls 455 514 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl02g00512 645 SMART WRKY_cls 279 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl02g00512 645 SUPERFAMILY WRKY DNA-binding domain 278 338 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl02g00512 645 MobiDBLite consensus disorder prediction 364 391 - -
Eupl02g00512 645 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 102 544 IPR044810 GO:0003700
Eupl02g00512 645 FunFam WRKY transcription factor 33 442 508 - -
Eupl02g00512 645 ProSiteProfiles WRKY domain profile. 274 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl02g00512 645 MobiDBLite consensus disorder prediction 1 24 - -
Eupl02g00512 645 FunFam WRKY transcription factor 266 339 - -
Eupl02g00512 645 Gene3D WRKY domain 272 339 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl02g00512 645 MobiDBLite consensus disorder prediction 364 439 - -
Eupl02g00512 645 Gene3D WRKY domain 442 508 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl02g00512 645 ProSiteProfiles WRKY domain profile. 450 515 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl02g00512 645 MobiDBLite consensus disorder prediction 252 281 - -
Eupl02g00512 645 MobiDBLite consensus disorder prediction 112 171 - -
Eupl02g00512 645 MobiDBLite consensus disorder prediction 416 431 - -
Eupl02g00512 645 SUPERFAMILY WRKY DNA-binding domain 447 515 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl02g00512 645 MobiDBLite consensus disorder prediction 252 269 - -
Eupl02g00512 645 MobiDBLite consensus disorder prediction 112 126 - -
Eupl02g00512 645 Pfam WRKY DNA -binding domain 280 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl02g00512 645 Pfam WRKY DNA -binding domain 456 512 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00512 Eupl-Chr2 5931600 5942028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00512 77 645 WRKY Transcription Factor Family AT4G26640 49.570 7.83e-162 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl02g00512 WRKY 4.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00512 - - nnu:104606587 863.218