Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00503 ATGGCGGCGTCTCGATTGTCTTCTGGTGAGATTCATGTGATTGTCGGGCCAATGTTCGCTGGGAAAACCACGGCTCTCCTTCGTCGGATTCAGTCTGAAAGCGACAATGGCAGAAGTGTAGCGATAATCAAATCGAACAAGGATGCACGATACGGACTAGATTCTATCGTGACCCATGATGGGGAAAAATTGCCATGCTGGGCTTTGCAAGATCTGTCATCATTCAAACAGACTATTGGACCTGATGCTTATGACAAGCTGGATGTGATAGGAATTGATGAAGCTCAATTCTTTGAAGACCTTTACGATTTCTGCTGCAAGGCAGCTGATCATGATGGGAAGACAGTAATTGTTGCTGGCCTGGATGGTGACTACTTGAGAAGGAGATTTGGTTCAGTGCTTGATATCATTCCCTTGGCTGACTCTGTAAGTAAGTTAACAGCCCGATGTGAGCTCTGCAGCAAGTGTGCCTTGTTTAGCTTAAGGAAGACACAGGAAACACGGACAGAATTGATTGGTGGGGCTGGTGTCTACATGCCGGTCTGTCGACAGCATTATGTCAATGGACAAGTAGTCACTGAAGCTGCAAACATTGTTCTGGAACCTCGAAAGAATTTAATGACAAACCAATGCAACCCTCCCGGGGCAAGGACAACTTCCAAGCGTGGTAAGTCTTTTACAGTCAAAGAAGATGAACAACTCTGTCGAAGCTGGTTGGCCATCTCCCAGGACCCCATTATAGGCACCAACCAGAAGAGTTCAACTTTATGGACCCGAATTACCACACACTATGATGAATTTAAGTCTTCGGACTTCAAGAGGTCTGAGAATTCGCTTTGCAATCGTTGGTCAACAATCCAAATCTCGGTTAACAAGTTTTGTGGGTTCCTTGCCCAGATAGAAGAGAGGAACCAAAGCGGAACTATCATCATGGACAAGATTGTTGATGCCAAACGCATGTACGAAGATGTACAAAAGAAGCCCTTCAACTTTGATCATTGTTGGTGTATCTTGCGTGGTGCTAGTAACTGGGAAAAGTTGATAAAAAAGCCTGTGATTAAACTTGTAGACTCCCCTACAGACCCCATCTCGACTGCTACATCCTCTACGATGCACTCGTCTGTCATTGGCGAGATGGATGATTGTGTTGTTATTGGTGACTTAAGAGAAAGGCCTTTGGGAAGAAAGGCAGAGAAAGAATTGCGAAAAAGGAAGATTGATGATAATGATCAAGTAATGAAGCGATTGATGGAGCAAAATGAGGCTATTGCGGAAATAATGGTAAGGAAAGAGGAACTGATAGCAAAACAGGAAGCAAGAAGGGAGGTGAGGGAAGCGAGGGAGGCAAAGAGGGAGGCGAGGGAGCAAAGGTTAGAAGATGACGCAATTATGCAGCTTGTCACCTCCAACATGGATGATATGCAAAAGGCGTATTATAATCGTCGCAAAGCGGAGATATTCAATCGGTTGATGGACCCTGTACTTTGA 1488 0.4496 MAASRLSSGEIHVIVGPMFAGKTTALLRRIQSESDNGRSVAIIKSNKDARYGLDSIVTHDGEKLPCWALQDLSSFKQTIGPDAYDKLDVIGIDEAQFFEDLYDFCCKAADHDGKTVIVAGLDGDYLRRRFGSVLDIIPLADSVSKLTARCELCSKCALFSLRKTQETRTELIGGAGVYMPVCRQHYVNGQVVTEAANIVLEPRKNLMTNQCNPPGARTTSKRGKSFTVKEDEQLCRSWLAISQDPIIGTNQKSSTLWTRITTHYDEFKSSDFKRSENSLCNRWSTIQISVNKFCGFLAQIEERNQSGTIIMDKIVDAKRMYEDVQKKPFNFDHCWCILRGASNWEKLIKKPVIKLVDSPTDPISTATSSTMHSSVIGEMDDCVVIGDLRERPLGRKAEKELRKRKIDDNDQVMKRLMEQNEAIAEIMVRKEELIAKQEARREVREAREAKREAREQRLEDDAIMQLVTSNMDDMQKAYYNRRKAEIFNRLMDPVL* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00503 495 Coils Coil 416 459 - -
Eupl02g00503 495 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 147 189 - -
Eupl02g00503 495 FunFam Thymidine kinase 5 146 - -
Eupl02g00503 495 Pfam No apical meristem-associated C-terminal domain 327 486 IPR029466 -
Eupl02g00503 495 PANTHER THYMIDINE KINASE 7 204 IPR001267 GO:0004797|GO:0005524
Eupl02g00503 495 FunFam Thymidine kinase 147 189 - -
Eupl02g00503 495 Gene3D - 147 188 - -
Eupl02g00503 495 Gene3D - 3 146 IPR027417 -
Eupl02g00503 495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 147 IPR027417 -
Eupl02g00503 495 Pfam Thymidine kinase 9 186 IPR001267 GO:0004797|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00503 Eupl-Chr2 5809766 5816372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00503 222 344 Glutathione S-transferase Gene Family AT5G41240 27.559 5.92e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00503 K00857 - nnu:104606582 341.658