Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00498 ATGGTTTCGCAGGAAGATTCTAACGCGAATCAACTTCCTTCAACACAAACTCTCTGCTCGTCACCAAATTCATCTAAGATTCAGAGACCTCTAGGTCGATCGATGCGAACGATTCGCTCGAATCTCTTCCCAAACGACCGTTCCTACTCATTTACCGGTCCGAACGCCGGAAAATCCGGCGGAATCTCCGGAAGCATGACAGAATCCGTCATCGATTTTAGACTCAGAGAGCTAGCCATAGAGAACAACAAATCATTGAAGTCCTCTTCTGAGTCCAATTTTCTCGATCTCTCTCAAGCTTTAAGTGACTTCTCTGCTTGTAGCAGCGACATCTCTGGAGAATTACAGAGATTAGCTTGTCTTCCATCATCAGAAGATCTAGAGAGTAGTGAATCCTCAGATCTGGAGCCGGAGTCATGGTTAGGGTTTCTTCAACGCGAGAACCTCTCGTCGGAGATCTTCGAGAGCATTTCTCCGGAGAATCTAGAACCAGCGGTGAAAATCTGTGTAGAAGGCCTTCTTTCTCCAGTGATCGCCATAAAACGCTCGGCCGCAGCGAAACTACGTCTACTCGCGAAAAACCGGTCGGAAAATCGAGCTTTGATCGGTGAATCTGGTGCGATCCCTGCCTTGATTCCTCTCCTCCGCTGCACCGATCCATGGACGCAAGAACACGCAGTAACAGCTCTGCTAAATCTCTCTCTCCACGAAGAAAACAAGACCTTGATCACAAACGCCGGAGCGATTAAACCGCTCGTGTACGTTTTGAAAACCGGCACAGAAGCATCGAAGCAAAACGCCGCGTGTGCACTGCTCAGCCTCTCGTTAATCGACGACAACAAGATCTCGATCGGTGCATGCGGAGCAATCCCACCGTTGGTTTCCCTCCTCTTAAATGGATCAAATCGAGGGAAGAAAGACGCCCTCACGACGCTCTACAAGCTATGTTCGATGAAGCAGAACAAAGAGAGGGCTGTGAATGCTGGAGCCGTAAAACCGCTAGTGGTTTTAGTTTCGGAGCAGGGGAACGGTTTGGCGGAGAAGGCCATGGTGATTTTGAGCAGCTTAGCTGGTATTCGAGAGGGCAAAACCGCAATTGTGGAGGAAGGCGGTATTCCGATTTTGGTTGAAGCAATCGAAGACGGCTCGGTGAAAGGGAAGGAGTTTGCTGTGCTGACGCTTCTACAACTTTGTACAGACAGCCTGAGGAACAGAGGGTTGCTGGTGAGGGAAGGTGGGATCCCTCCGCTCGTCGCACTTTCTCAGGCGGGAACGGCTCGAGCGAAGCACAAGGCTGAAACGCTACTTAGGTATTTGAGAGAGCCGAGACAAGAGGCCTCTTCTTCAAGTCCTTGA 1356 0.5007 MVSQEDSNANQLPSTQTLCSSPNSSKIQRPLGRSMRTIRSNLFPNDRSYSFTGPNAGKSGGISGSMTESVIDFRLRELAIENNKSLKSSSESNFLDLSQALSDFSACSSDISGELQRLACLPSSEDLESSESSDLEPESWLGFLQRENLSSEIFESISPENLEPAVKICVEGLLSPVIAIKRSAAAKLRLLAKNRSENRALIGESGAIPALIPLLRCTDPWTQEHAVTALLNLSLHEENKTLITNAGAIKPLVYVLKTGTEASKQNAACALLSLSLIDDNKISIGACGAIPPLVSLLLNGSNRGKKDALTTLYKLCSMKQNKERAVNAGAVKPLVVLVSEQGNGLAEKAMVILSSLAGIREGKTAIVEEGGIPILVEAIEDGSVKGKEFAVLTLLQLCTDSLRNRGLLVREGGIPPLVALSQAGTARAKHKAETLLRYLREPRQEASSSSP* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00498 451 SUPERFAMILY ARM repeat 158 439 IPR016024 -
Eupl02g00498 451 FunFam U-box domain-containing protein 4 152 304 - -
Eupl02g00498 451 Gene3D - 157 304 IPR011989 -
Eupl02g00498 451 Gene3D - 305 444 IPR011989 -
Eupl02g00498 451 PANTHER U BOX DOMAIN-CONTAINING 105 439 - -
Eupl02g00498 451 SMART arm_5 277 317 IPR000225 GO:0005515
Eupl02g00498 451 SMART arm_5 318 358 IPR000225 GO:0005515
Eupl02g00498 451 SMART arm_5 236 276 IPR000225 GO:0005515
Eupl02g00498 451 SMART arm_5 400 441 IPR000225 GO:0005515
Eupl02g00498 451 SMART arm_5 195 235 IPR000225 GO:0005515
Eupl02g00498 451 SMART arm_5 359 399 IPR000225 GO:0005515
Eupl02g00498 451 FunFam U-box domain-containing protein 4 305 446 - -
Eupl02g00498 451 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 329 371 IPR000225 GO:0005515
Eupl02g00498 451 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 206 248 IPR000225 GO:0005515
Eupl02g00498 451 MobiDBLite consensus disorder prediction 1 35 - -
Eupl02g00498 451 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 288 330 IPR000225 GO:0005515
Eupl02g00498 451 Pfam Armadillo/beta-catenin-like repeat 278 317 IPR000225 GO:0005515
Eupl02g00498 451 Pfam Armadillo/beta-catenin-like repeat 196 234 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00498 Eupl-Chr2 5755790 5759030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00498 108 444 U-box Gene Family AT2G23140 46.328 1.25e-86 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00498 - - nnu:104594195 684.871