Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00488 ATGGGTATTTCTCGTGATTCCATGCACAAGAGACGCGCCACAGGAGGAAAAAAGAAGGCATGGAGAAAGAAGCGAAAGTACGAGCTTGGGCGACAACCGGCGAACACTAAGCTATCGAGCAACAAGACAGTTCGGAGGGTTAGAGTTCGTGGAGGGAACGTGAAGTGGCGTGCTCTGAGGCTTGACACTGGCAATTACTCGTGGGGGAGCGAGGCGGTGACCCGGAAGACCCGTATCCTCGATGTGGTCTACAATGCGTCGAACAACGAGCTGGTGCGTACCCAGACTTTGGTGAAGAGTGCTATCGTGCAGGTCGATGCGGCTCCTTTCAAGCAGTGGTACCTCCAGCACTATGGCCTTGACATAGGGCGTAAGAAAAAGAGCTCTGCCCCCGCCAAGAAAGAAGGAGAGGAGGGTGAGGCTGTTGCTGAGGAGGCAAAGAAAAGTAACCATGTGACGAGGAAACTAGAAAAGCGTCAACAAGATCACAAGCTTGATCCCCATATTGAAGAGCAGTTTGGTGGTGGCCGGTTGTTGGCTGCAATCTCATCCCGGCCTGGTCAGTGTGGTCGATCTGATGGATATATTTTGGAGGGAAAAGAGCTGGAGTTCTACATGAAGAAGCTCCAGAGGAAGAAGGGCAAGGGTAGCGCAGGTGCTGCTTAA 666 0.5255 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGLDIGRKKKSSAPAKKEGEEGEAVAEEAKKSNHVTRKLEKRQQDHKLDPHIEEQFGGGRLLAAISSRPGQCGRSDGYILEGKELEFYMKKLQRKKGKGSAGAA* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00488 221 MobiDBLite consensus disorder prediction 1 42 - -
Eupl02g00488 221 Gene3D Ribosomal protein S8e, subdomain 108 176 IPR042563 -
Eupl02g00488 221 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Eupl02g00488 221 MobiDBLite consensus disorder prediction 11 26 - -
Eupl02g00488 221 FunFam 40S ribosomal protein S8 109 176 - -
Eupl02g00488 221 CDD Ribosomal_S8e_like 5 197 - -
Eupl02g00488 221 Gene3D - 26 213 - -
Eupl02g00488 221 Pfam Ribosomal protein S8e 5 197 IPR022309 -
Eupl02g00488 221 NCBIfam ribosomal protein eS8 1 199 IPR001047 GO:0003735|GO:0005840|GO:0006412
Eupl02g00488 221 PANTHER 40S RIBOSOMAL PROTEIN S8 1 215 IPR001047 GO:0003735|GO:0005840|GO:0006412
Eupl02g00488 221 MobiDBLite consensus disorder prediction 129 170 - -
Eupl02g00488 221 FunFam 40S ribosomal protein S8 32 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00488 Eupl-Chr2 5672980 5676553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00488 1 206 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 83.092 1.08e-123 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00488 K02995 - nnu:104594192 380.563