Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00480 ATGTCCCAAACAGAGATTTCTAGTGCTCTGCAAGAACCTCGTCAGGTGGTTCGAAAATTCCAGGCAAGGCCTCAACATGAAGGAGATGGAGCTGTCGTTCGACGAAGCATAGGACGGTTTGAATTGAAATACTTCGACCCTTTTCTTCTTCTGGATGAATTCTCAATTTCAGCTCCTGCTGGATTTCCTGACCATCCACACAGAGGGTTCGAGACTGTGACCTATATGTTGCAGGGAGCAGTCACACATGAAGACTTTGAGGGTCACAAGGGGACCATTAAAGAGGGGGATCTTCAGTGGATGACCGCAGGAAAAGGGATAGTGCACTCAGAAATGCCTGCAAGCCAAGGAACTCAAAAGGGTCTACAATTGTGGATCAACCTCTCTTCCAACTACAAAATGATTGAGCCAAAATATCAAGAACTGCTAAGCAAGGATGTCGTAGAAGTTGCGAAAGATGGCGTAAAAGTCCGAGTAATAGCAGGAGAGGCCATGGGAACGCAATCGCCAATCTACACAAGGACCCCCACCATGTATTTGGACTACACTCTCAAACCAGAAGCTCATCTTCAACAATTGATCCCTCCAACATGGAACTCCTTCATCTATGTTGTAGAAGGAGAGGGTGTTTTCTGCAATTCAAAATCTTCACCGACCACTGCACACCACCTTCTTCTTCTAGGCCCCGGTGATGGCGTCGAAGCTTGGAACAAGTCTTCCAAGCCCCTTAGGTTCATATTAGTCGGAGGTGAACCGTTGGGTGAACCTGTGGTGCAACTTGGGCCATTTGTAATGAACACCCAAGAGGAGATCGACCAGACCATAGAAGATTATCAGTATTGCATCAATGGGTTTGAGAAAGCTAAACAATGGAGATCACAGGTCAACCTTGAGCTTGATTTTTAG 906 0.4636 MSQTEISSALQEPRQVVRKFQARPQHEGDGAVVRRSIGRFELKYFDPFLLLDEFSISAPAGFPDHPHRGFETVTYMLQGAVTHEDFEGHKGTIKEGDLQWMTAGKGIVHSEMPASQGTQKGLQLWINLSSNYKMIEPKYQELLSKDVVEVAKDGVKVRVIAGEAMGTQSPIYTRTPTMYLDYTLKPEAHLQQLIPPTWNSFIYVVEGEGVFCNSKSSPTTAHHLLLLGPGDGVEAWNKSSKPLRFILVGGEPLGEPVVQLGPFVMNTQEEIDQTIEDYQYCINGFEKAKQWRSQVNLELDF* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00480 301 Gene3D Jelly Rolls 27 279 IPR014710 -
Eupl02g00480 301 FunFam pirin 27 165 - -
Eupl02g00480 301 CDD cupin_pirin_C 176 252 - -
Eupl02g00480 301 SUPERFAMILY RmlC-like cupins 16 293 IPR011051 -
Eupl02g00480 301 CDD cupin_pirin_N 31 128 - -
Eupl02g00480 301 PANTHER PIRIN-RELATED 1 294 IPR012093 -
Eupl02g00480 301 Pfam Pirin C-terminal cupin domain 179 281 IPR008778 -
Eupl02g00480 301 Pfam Pirin 33 126 IPR003829 -
Eupl02g00480 301 PIRSF Pirin 12 292 IPR012093 -
Eupl02g00480 301 Gene3D Jelly Rolls 148 253 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00480 Eupl-Chr2 5538193 5541731 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00480 13 289 Calmodulin-binding Proteins AT3G59220 59.140 3.83e-123 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00480 K06911 - msin:131219548 516.538