Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00479 ATGAGAGAAAGAAATGATCTCAATGAAAATATCATCTCAAACAACACCAGAAATAAGAGAAGGAAGATTAAAGACGAAGAAGAAGGGAATCAAGACATACCCCCAAGAAGATTCACTGAAGAAGAACATTCTGTACTACAACAACAACAACAACAACAAGAGCTGCAAATGAGCGGAGACATATTCAAACTCCCGCGCGACCTCTTCCTCGACATCCTCTCCCGATTACCCATCAAATCCATCTCTCAATGCAGGTGGGTATGCAAACCCTGGTGCGATATACTCCACTCCCCTCCTTTCACTAAAATTCAACTAGCCAGAACAAACTTCCCTTGCGTTATCCTTCACGACAGGTTGAGGCACACTAGCGATTTCTACTTGGTAGAACAAGAAGGTGAAGAAACCTTAGATAGTCTTCCTACCTCAACTGTCCTAAAAACCCACTTTAACAGATCGAACGAAAAATTCCATGTAGTGGGTTCTTGCAATGGTTTGCTCTGTTTGTCCCCAATTTCCTCCCATGATCCTGTCTACATTTGCAATCCTATTACAGGAGAGTACATGAGGCTCCCCAGACCCTCCAAGTGTGCCAATGTTGGCATTATCTCTGCATTTGGTTTTGCTCCAACCACTAACGAGTACAAGGTCATACGTATGTTGCATCACGGGGTCGATAAGAACCGTTCCTTTAAAGGGGAGGTTAAAGTGGAGGTTGAGATATACACTCTTGGATCGGGCAGGTGGAGAACCATAGCAGATTTTCCATATCCACTTTCCTTCAATCGGTCTCATGTCTTTGTGAATGGAGCTCTTCATTGGATCACTAATGAGTACAGTAAGGTGAATTTGTGCCAATTTATTGTTTCTTTCGATTTGGGTAGTGAGGAATTCCGAGCAGTCCCACCACCTCCTTGTTTCATCCCTGTAAGAGAGAGTGTGTATTACGATTTGGGGGTGTTGGATGAGCGTCTATGTTTGATTCATAATGGAATTGAAGACTTGATTGTGGTATGGATGATGAAGGATTATGGAATGAAAGAGTCCTGGACTATAGAGTATCTTATCAGAAAACACGTCCTTGGGCAGGGGGAACTGGATTTTAAACTGTTAAGAGTAATGAAAAATGGTGAAATCTTGCTTCTGTGTGGTCACACAACTCTGGGTTATTACGACCCCAAAAGAGGATTTAGGAGTATCCAGACTCGCGGTGTTCAATCCAGGTTCGATCAATTGGAAGCAATTGTTCACATTGGGAGTCTAATTTCACTCAGTAATATTGGTGTATGA 1287 0.4258 MRERNDLNENIISNNTRNKRRKIKDEEEGNQDIPPRRFTEEEHSVLQQQQQQQELQMSGDIFKLPRDLFLDILSRLPIKSISQCRWVCKPWCDILHSPPFTKIQLARTNFPCVILHDRLRHTSDFYLVEQEGEETLDSLPTSTVLKTHFNRSNEKFHVVGSCNGLLCLSPISSHDPVYICNPITGEYMRLPRPSKCANVGIISAFGFAPTTNEYKVIRMLHHGVDKNRSFKGEVKVEVEIYTLGSGRWRTIADFPYPLSFNRSHVFVNGALHWITNEYSKVNLCQFIVSFDLGSEEFRAVPPPPCFIPVRESVYYDLGVLDERLCLIHNGIEDLIVVWMMKDYGMKESWTIEYLIRKHVLGQGELDFKLLRVMKNGEILLLCGHTTLGYYDPKRGFRSIQTRGVQSRFDQLEAIVHIGSLISLSNIGV* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00479 428 NCBIfam F-box protein interaction domain 160 391 IPR017451 -
Eupl02g00479 428 CDD F-box_AtFBW1-like 64 100 - -
Eupl02g00479 428 Gene3D - 57 113 - -
Eupl02g00479 428 MobiDBLite consensus disorder prediction 1 43 - -
Eupl02g00479 428 Pfam F-box associated 265 350 IPR006527 -
Eupl02g00479 428 ProSiteProfiles F-box domain profile. 58 103 IPR001810 GO:0005515
Eupl02g00479 428 MobiDBLite consensus disorder prediction 15 43 - -
Eupl02g00479 428 Pfam F-box-like 63 100 IPR001810 GO:0005515
Eupl02g00479 428 PANTHER BNAA05G37150D PROTEIN-RELATED 63 404 - -
Eupl02g00479 428 SUPERFAMILY F-box domain 60 117 IPR036047 GO:0005515
Eupl02g00479 428 SMART fbox_2 64 104 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00479 Eupl-Chr2 5534094 5536567 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00479 237 351 Carbohydrate Esterase AT1G25141 27.869 1.30e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00479 - - ming:122064980 314.694