Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00477 ATGTCCCAAACAGAGATTTCTAGTGCTCTGAAAGAACCTCGTCAGGTGGTTCGAAATTTCCAAGCAAGACCTCAACATGAAGGAGATGGAGCCGTCGTTCGACGAAGCATAGGACGGTTTGAGTTGAAATACTTCGACCCTTTTCTTCTTCTGGATGAATTCTCAATTTCAGCTCCTGCTGGATTTCCTGATCATCCACACAGAGGGTTTGAGACTGTGACCTATATGTTGCAGGGAGCAGTCACGCATGAAGATTTTGAAGGTCACAAGGGGACCATAAAAGAGGGCGATCTGCAGTGGATGACCGCAGGAAAAGGGATAGTGCACTCAGAAATGCCTGCAAGCCAAGGAACTCAAAAGGGTCTACAGTTGTGGATCAACCTCTCTTCCAAGTACAAAATGGTGGAGCCAAAATATCAAGAACTACAAAGTAAGGATGTCTTAGAAGTCGCGAAAGATGGCGTAAAAGTTCGAGTAATAGCAGGAGAGGCCATGGGAACGCAATCACCAATCTACACAAGGACCCCCACCATGTATTTGGACTTCACTCTCAAACCAGAAGCTCATCTTCAACAACTGATCCCTCCAACATGGAACTCCTTCATCTATGTTGTAGAAGGTGAGGGTGTTTTCTGCAATTCGAAATCTTCGCCGACCACTGCACACCACTTTCTTCTTCTAGGACCCGGTGATGGCGTCGAAGCTTGGAACAAATCTTCCAAGACCCTCAGGTTCATATTAGTTGGAGGTGAGCCATTGGGCGAACCCATGGTGCAACTCGGGCCCTTTGTAATGAACACCCAAGAGGAGATCGACCAGACCATAGAAGATTATCAGTATTGCATCAATGGGTTTGAGAAAGCTAAACACTGGAGGTCATAA 882 0.4637 MSQTEISSALKEPRQVVRNFQARPQHEGDGAVVRRSIGRFELKYFDPFLLLDEFSISAPAGFPDHPHRGFETVTYMLQGAVTHEDFEGHKGTIKEGDLQWMTAGKGIVHSEMPASQGTQKGLQLWINLSSKYKMVEPKYQELQSKDVLEVAKDGVKVRVIAGEAMGTQSPIYTRTPTMYLDFTLKPEAHLQQLIPPTWNSFIYVVEGEGVFCNSKSSPTTAHHFLLLGPGDGVEAWNKSSKTLRFILVGGEPLGEPMVQLGPFVMNTQEEIDQTIEDYQYCINGFEKAKHWRS* 294
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00477 293 CDD cupin_pirin_C 176 252 - -
Eupl02g00477 293 FunFam pirin 27 165 - -
Eupl02g00477 293 CDD cupin_pirin_N 31 128 - -
Eupl02g00477 293 PANTHER PIRIN-RELATED 1 293 IPR012093 -
Eupl02g00477 293 Pfam Pirin C-terminal cupin domain 179 281 IPR008778 -
Eupl02g00477 293 Gene3D Jelly Rolls 148 253 IPR014710 -
Eupl02g00477 293 PIRSF Pirin 12 292 IPR012093 -
Eupl02g00477 293 SUPERFAMILY RmlC-like cupins 16 292 IPR011051 -
Eupl02g00477 293 Gene3D Jelly Rolls 27 279 IPR014710 -
Eupl02g00477 293 Pfam Pirin 33 126 IPR003829 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Eupl02g00477 Eupl-Chr2 5513817 5516821 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00477 13 289 Calmodulin-binding Proteins AT3G59220 58.781 8.72e-123 351
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00477 K06911 - msin:131219548 513.842