Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00415 ATGAAAGTAGAGAAGTTCGAAAGAGAGATGGGGAGACCGATTGAAGAAGTTACAGAGGTGGTGGAGGAGGAGGAGAAGGAGGTCGTGATGGTGGAGCTGTCGCCGGAGATGAAGATTACGATTGACGGAGAAGAGGTGGAGAGAGACGAAGAAGAAGAGCTGTTCGTTCCGCCTCTGAACTTCTCCATGGTCGACAATGGCGTCTTTAGGTCTGGTTTTCCTGATGGCGCCAACTTCACCTTCTTACAAAACCTCGGTCTTCGCTCCGTTATATATCTTTGTCCGGAACCGTATCCGGAGGCGAACACTGAGTTTCTTAAGTTGAATGATATTCGGCTTTTCCAGTTTGGGATCGAAGGATGTAAGGAACCTTTTGTGAACATTCCAGAGGATGTGATTCATGAGGCACTCAAAGTTGTCCTTGATGTTAGAAACCACCCACTTTTAATTCATTGCAAACGGGGAAAGCATCGAACGGGTTGTCTGGTTGGATGCATAAGAAAATTGCAAAGATGGTGTCTATCTTCAGTGTTCGATGAGTACCAACGGTTTGCAGCTGCCAAAGCTAGGATTTCGGATCAGAGGTTTATGGAGAAGTTTGATGTTTCCAGCTTGCAACATTTGTCAACTTCCTTCTCGTGTTCGAAGAGTAAGGAATGA 660 0.4591 MKVEKFEREMGRPIEEVTEVVEEEEKEVVMVELSPEMKITIDGEEVERDEEEELFVPPLNFSMVDNGVFRSGFPDGANFTFLQNLGLRSVIYLCPEPYPEANTEFLKLNDIRLFQFGIEGCKEPFVNIPEDVIHEALKVVLDVRNHPLLIHCKRGKHRTGCLVGCIRKLQRWCLSSVFDEYQRFAAAKARISDQRFMEKFDVSSLQHLSTSFSCSKSKE* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00415 219 ProSitePatterns Tyrosine specific protein phosphatases active site. 150 160 IPR016130 GO:0016311|GO:0016791
Eupl02g00415 219 PRINTS Plant and fungal dual specificity phosphatase signature 92 105 IPR020428 GO:0016791
Eupl02g00415 219 PRINTS Plant and fungal dual specificity phosphatase signature 55 72 IPR020428 GO:0016791
Eupl02g00415 219 PRINTS Plant and fungal dual specificity phosphatase signature 111 125 IPR020428 GO:0016791
Eupl02g00415 219 PRINTS Plant and fungal dual specificity phosphatase signature 128 142 IPR020428 GO:0016791
Eupl02g00415 219 CDD PFA-DSP_Siw14 54 201 - -
Eupl02g00415 219 ProSiteProfiles Dual specificity protein phosphatase domain profile. 60 214 IPR020422 GO:0006470|GO:0008138
Eupl02g00415 219 PANTHER TYROSINE-PROTEIN PHOSPHATASE 50 208 - -
Eupl02g00415 219 Gene3D Protein tyrosine phosphatase superfamily 54 204 IPR029021 -
Eupl02g00415 219 Pfam Tyrosine phosphatase family 56 208 IPR004861 -
Eupl02g00415 219 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 55 201 IPR029021 -
Eupl02g00415 219 FunFam probable tyrosine-protein phosphatase At1g05000 54 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00415 Eupl-Chr2 4770476 4778264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00415 53 216 Protein tyrosine phosphatase (PTP) family AT4G03960 76.220 2.83e-96 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00415 K18045 - ming:122069668 314.694