Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00410 ATGCATCCCACCACCACCACCGCACCACCATCGCCACAACCCCTAACCCAAACCCTCAACTTCATCAACCACCTCCTCTCTCTCCTCCTCCTCTCCTCCCTCACTGTCAAATCCTTCATCGGACGATGGCAAGTCCTCCGCTCCAAACTATCCAATCTCAAATCCTCGCTCGCCGAAATCTCCGACTCTCCTCACTGGTCCGAGAACCCTCTCTTACAAGACCTCCTCCCTAATCTTCTCTCCACTTTACAAAAAATCCAATCCCTCTGTCAGCAATGCCAGAACGATCCTTCTTCCTACACAGGCGGGAAGCTCCTCATGCAGAGCGACATCGATATGGCATCGGCTTCTCTCTCTACTCATCTTCACGACATCGAGTTGTTGCTCAAATCAGGCGTTCTTCGTCAATCCAACGCGATTGTCCTATCGCAACCTGGTCCTGGTTCGGGGAAAGAAGAACTAGGTTTTTTTATTAGAGACCTCTTCGCGAGGCTTCAGATCGGAGGGATTGAGTTCAAGAAGAAGGCTTTGGATTCGCTCCTCCAGCTTCTCAGAGAGGATGATAAGTCTGCGATTCTGGTGGCGAAAGAGGGAGATATGAGGTATTTGGTACATTTAATTGAGTCGAATCATCATCCTTCAGTTCGGGAGCAAGCTGCAGTAGCTGTATCTGTTCTTGCCAGTGCTAGTGATTCATCGATGAAAAGCGTGTTCGAAGAAGGGGGTTTAGGGCCTCTATTGCGTCTTCTTGAATCCGGATCATCGGGGTTGAAGGAGAATGCGGCGATGGCAGTCGAGGCGATCACCGCTGATCCAGAAAACGCATGGGCGATTTCCGCGTACGGTGGTATTCCGGTTTTGGTCGATGCGTGTCGATCAGGATCACCAGTAACGCAGACTCATGCAGCCGGAGCGATGAAGAATGTAGCTGCGGTGGAGGATATCAGGGTAGCAATGGCGGAAGAAGGCGCGGTGGCCGTTTTAGTCCAGTTATTGGTTTCCGGCACTGGCGCTGCTCAAGAAAAAGCTGCTAATTGTCTTTGGATCCTTGCCTCGGCTGGCGATGATTTTAGGGTTTCGATATTACAGGAAGGGGGATTACAGAGTCTTCTCCAATTGATTCAAGAGTCTTCAAATTCGGATACATTAGAGCACGTTCTGCGAGCGATTTACGCCCTTTCAGGGTCCGCTTCGACGGTCAGGATCTTATCTTCTTCAACTTCGTTTCTATTACAGCTTGCGGAGCTAATCAAGGACGGGACCATAATCGCTCAACAGATCTCGGCATCGATTCTCTGTAATTTATCGATTAGCGATGCGAACAAGCGGACGATATCTGGGTGCATGGGAGCACTAGTGAAAATGGTGGAGTCCTCTAAGCCGGTAGGGTTGCAGGAGGTAGCGGCACAAGCGCTGGTTTCTTTGTTGTCCATCCGATCGAATCGGAAAGATCTTGCTAGGGATGAGAAGAGTGTGTTGAGGTTGGTTCAGATGTTGGATCCTAAGAACGAATTAGTTTGTAAGAAGTTTCCGGTATCGGTGATCTCTGCGATAGTGTCCGGGGGCAGCCATGGATGTCGAAAGAGGATTGTCGCAGCTGGAGCTTCCACACATTTGCAGAAGCTCGCGGAGATGGATGTCGCCGGAGCTAAGAAGGCGTTACAGAGACTCGCGGGAAATCGTCTCAAGAACATCTTCAGCAGGACTTGGAGGGAATAA 1719 0.5026 MHPTTTTAPPSPQPLTQTLNFINHLLSLLLLSSLTVKSFIGRWQVLRSKLSNLKSSLAEISDSPHWSENPLLQDLLPNLLSTLQKIQSLCQQCQNDPSSYTGGKLLMQSDIDMASASLSTHLHDIELLLKSGVLRQSNAIVLSQPGPGSGKEELGFFIRDLFARLQIGGIEFKKKALDSLLQLLREDDKSAILVAKEGDMRYLVHLIESNHHPSVREQAAVAVSVLASASDSSMKSVFEEGGLGPLLRLLESGSSGLKENAAMAVEAITADPENAWAISAYGGIPVLVDACRSGSPVTQTHAAGAMKNVAAVEDIRVAMAEEGAVAVLVQLLVSGTGAAQEKAANCLWILASAGDDFRVSILQEGGLQSLLQLIQESSNSDTLEHVLRAIYALSGSASTVRILSSSTSFLLQLAELIKDGTIIAQQISASILCNLSISDANKRTISGCMGALVKMVESSKPVGLQEVAAQALVSLLSIRSNRKDLARDEKSVLRLVQMLDPKNELVCKKFPVSVISAIVSGGSHGCRKRIVAAGASTHLQKLAEMDVAGAKKALQRLAGNRLKNIFSRTWRE* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00410 572 Gene3D - 409 558 IPR011989 -
Eupl02g00410 572 Gene3D - 314 408 IPR011989 -
Eupl02g00410 572 SMART arm_5 230 270 IPR000225 GO:0005515
Eupl02g00410 572 SMART arm_5 312 352 IPR000225 GO:0005515
Eupl02g00410 572 SMART arm_5 354 395 IPR000225 GO:0005515
Eupl02g00410 572 SMART arm_5 187 228 IPR000225 GO:0005515
Eupl02g00410 572 SMART arm_5 271 311 IPR000225 GO:0005515
Eupl02g00410 572 SMART arm_5 438 477 IPR000225 GO:0005515
Eupl02g00410 572 Gene3D - 158 313 IPR011989 -
Eupl02g00410 572 Pfam Armadillo/beta-catenin-like repeat 271 310 IPR000225 GO:0005515
Eupl02g00410 572 SUPERFAMILY ARM repeat 159 506 IPR016024 -
Eupl02g00410 572 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 241 283 IPR000225 GO:0005515
Eupl02g00410 572 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 11 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00410 Eupl-Chr2 4715752 4718778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00410 322 512 U-box Gene Family AT2G23140 29.534 3.79e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00410 - - nnu:104606500 795.808