LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl02g00378	ATGGCGAATCTGCCTCAATCGCTATCTATGAACCGTCCATTCGGCGGTCCTAACGCCTCTGTTGCGAACGCTACCGCCTCTCAAGCCAACAAAGAGCGGAAAATGGCCTCGGCGGAGCAGTTGGTGTATGACCTTTGCAACCCTGATCTCCGAGAAAACGCCCTTCATGATCTCTCAAAGAAGAGAGAGATTTTTCAAGATTTGGCCCCATTGCTGTGGAATTCTGGCAGTTCTATTGCTGCACTCTTACAGGAGATAGTTTCAATATACCCTGTTCTATCACCACCAACCCTCACTCCAGGAGCCTCTAATAGAGTTTGCAATGCACTTGCTCTTCTTCAGTGTGTAGCTTCTCACCCGGATACAAGGACGTTGTTCCTCAATGCTCATATACCTTTGTATTTGTACCCTTTTTTAAATACTACAAGCAAGACGAGACCATTTGAATATCTGAGGCTTACCAGCTTGGGTGTTATTGGTGCACTTGTAAAGGTTGATGATACAGAAGTTATTAGTTTCCTCCTCTCGACAGAAATAATTCCCTTGTGTCTGCGAACCATGGAGATGGGTAGCGAACTTTCAAAAACGGTGGCCACCTTTATCGTTCAAAAAATTCTGCTGGATGATGTGGGGCTACGTTATATTTGTGCTACAGCCGAGCGATTTTTTGCAGTTGGTCGTGTTCTGGGAACCATGGTTGCAACACTTGCTGAACAACCCTCATCACGGCTGCTAAAACATATAATTCGTTGCTATCTTCGACTGTCAGATAATCCAAGGGCATGTGAAGCATTAAGAAATTGCCTTCCTGAAATGTTAAGAGATGCAACCTTCAGCAGTTGCCTTCGTGAAGATCCAACAACCAAGAGGTGGTTACAACAGCTGATCCATAATGTATCAGGAGGAAACCGGGTGGCAGCACTACAGGCCGGGGGAGGGCTCGATCTTATGCTAGCTAACTAA	963	0.4579	MANLPQSLSMNRPFGGPNASVANATASQANKERKMASAEQLVYDLCNPDLRENALHDLSKKREIFQDLAPLLWNSGSSIAALLQEIVSIYPVLSPPTLTPGASNRVCNALALLQCVASHPDTRTLFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGRVLGTMVATLAEQPSSRLLKHIIRCYLRLSDNPRACEALRNCLPEMLRDATFSSCLREDPTTKRWLQQLIHNVSGGNRVAALQAGGGLDLMLAN*	321

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl02g00378	320	Pfam	Cell differentiation family, Rcd1-like	41	299	-	-
	Eupl02g00378	320	FunFam	Cell differentiation protein RCD1	31	302	-	-
	Eupl02g00378	320	SUPERFAMILY	ARM repeat	103	277	IPR016024	-
	Eupl02g00378	320	MobiDBLite	consensus disorder prediction	1	30	-	-
	Eupl02g00378	320	PANTHER	UNCHARACTERIZED	29	302	IPR007216	GO:0006402\|GO:0030014
	Eupl02g00378	320	Gene3D	-	29	300	IPR011989	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl02g00378	Eupl-Chr2	4278749	4297048	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	Rcd1-like	Eupl02g00378		Rcd1	3.1e-128	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl02g00378	K12606		-	nnu:104594061	574.318