Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00368 ATGGACTGGACCAGAGGCCGGACCATTGGCCGCGGCGCGTCAGCCACAGTCTCAGTCGCCATGGCTCATCAGTCCAGCGAGCTCTTTGCGGTTAAATCAGTTGAACTTTCTCAATCGGAATTCTTACAGAGGGAACAGAGTATGCTCTCTTTACTAAAATCTCCACAGATAGTTCAGTACATGGGCTGCGATGTTACTACTGAAAATGGCAAGGTCATGTACAATCTCTTCATGGAGTATATTTCCGGTGGGACCCTTACGGATGCAATTCAGAAACAAGGTGGCCGGCTCAAAGAATCTACGATCAGATCTCACACGCGCGCAATTCTACAAGGGCTAGAGTACCTACATTCGAATCGTCTAGTGCATTGTGATATCAAGGGGCGTAACGTTTTAGTAGGAAACGATGGCGCAAAAATCGCTGATTTGGGTTGTGCTAGGTGGATTGACAAGGAGGAAGCTTCGAGAAGGCCGATTGCTGGTACGCCTGTTTTCATGGCTCCTGAAGTAGCACGCGGGGAAGAACAAGGATTTCCTTCTGATGTGTGGGCTCTTGGGTGTACAGTGATCGAAATGGCTACTGGCCGTCCACCATGGTCTGATGCTGATACGATCTCTGTTCTTTACCGAATTGCATTTTCTGGGGACGTGCCAGAGTTTCCAAGCTTCTTGTCTGAGGAAGCTAAGGATTTCTTAAGCAAGTGTTTAAGAAGAGATCCGAATGAGCGATGGACGGTTAATCAACTTCTTAAACATCCGTTTGTTGATGAACCCAATTCTCAATTGAAACAAATTCAAGAATCTACTTCGAATTCTCCAACTTGTGTACTGGATCAAGACTTCTGGAACTCATTTGAGGAATTGGAAACACGGACCAACACCTGTTCTTCAAATTCTCCAGCTGAAAGACTCCGACAGTTGAGTAACGGCATTTCGTCTTCCTCTCCAAGGCTACCCAATTGGACATGGGAGGAAAATTGGGTCACCATCAGATGCAACAACAACAACGACGATGACGATAACGACCGCGAAGGCGAAGGCGAGAATTTTTCCAGCCAGAACCACAATATGATCGCGGCCGACGAACCCATGACGACTACGTCGACTAGTGGGTCACTTGCATTTTGGATTAGCTCTGTTGTTGATAAGGATTTGTTGAATTACTCTGTTAATGATGTTAGCAGTAGTAGGAGTAGAAGCAAATTTTGTAGTGGGGGAGATTTTGTGAAGTTCTGTAAATGTATATCTAGCAATTTTAATTTTAAAACACACAGGATTTCTGTTTTCTGCAATTCCAATTCTCTTAAAGCCCTCTATCCAACTTGA 1326 0.451 MDWTRGRTIGRGASATVSVAMAHQSSELFAVKSVELSQSEFLQREQSMLSLLKSPQIVQYMGCDVTTENGKVMYNLFMEYISGGTLTDAIQKQGGRLKESTIRSHTRAILQGLEYLHSNRLVHCDIKGRNVLVGNDGAKIADLGCARWIDKEEASRRPIAGTPVFMAPEVARGEEQGFPSDVWALGCTVIEMATGRPPWSDADTISVLYRIAFSGDVPEFPSFLSEEAKDFLSKCLRRDPNERWTVNQLLKHPFVDEPNSQLKQIQESTSNSPTCVLDQDFWNSFEELETRTNTCSSNSPAERLRQLSNGISSSSPRLPNWTWEENWVTIRCNNNNDDDDNDREGEGENFSSQNHNMIAADEPMTTTSTSGSLAFWISSVVDKDLLNYSVNDVSSSRSRSKFCSGGDFVKFCKCISSNFNFKTHRISVFCNSNSLKALYPT* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00368 441 ProSiteProfiles Protein kinase domain profile. 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00368 441 Pfam Protein kinase domain 4 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00368 441 Gene3D Transferase(Phosphotransferase) domain 1 88 314 - -
Eupl02g00368 441 MobiDBLite consensus disorder prediction 334 354 - -
Eupl02g00368 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Eupl02g00368 441 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 307 - -
Eupl02g00368 441 SUPERFAMILY Protein kinase-like (PK-like) 2 319 IPR011009 -
Eupl02g00368 441 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Eupl02g00368 441 SMART serkin_6 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00368 441 CDD STKc_MAPKKK 2 255 - -
Eupl02g00368 441 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Eupl02g00368 441 FunFam Mitogen-activated protein kinase kinase kinase 17 2 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00368 Eupl-Chr2 4129031 4130488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00368 2 341 MAP Kinase Kinase Kinase AT5G55090 49.584 9.16e-115 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Eupl02g00368 Pkinase 7.5e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00368 K20716 - nnu:104594042 501.516