Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00335 ATGTCTTGCTCCAATCTAACAATGTGGGTCTCCTCCAAACCTTCTCTTTCTGACCCTTCTTCACTCTCCTTTAGGTCTCTACTCAGCCCTTTTCGTCTTCCTTCCTATAATTCAACTACCACTACCCCTTCTCGATCGTTGTCGCCGAACCCTATTCAGTGCGGTCTTCGTGAGCTTCGAGAGCGTATCGATTCGGTCAAGAATACCCAGAAGATCACTGAAGCTATGAAGCTTGTCGCAGCTGCTAAGGTCAGAAGAGCACAAGAAGCCGTCGTCAATGGCCGACCCTTTTCAGAGACACTCGTCGAGGTTCTCTACAACATCAATGAGCAGCTCCTGACTGAAGACATCGATGCCCCTCTCACAAACATTAGGACTGTCAAGAAAGTTGCCCTTGTTGTTGTAACTGGCGATCGTGGTCTCTGCGGAGGTTTCAACAATGCAATTATCAAAAAGGCTGAGTCCCGGATCGCCGAATTGAAGGATCTTGGCCTAGATTACACTATTATCAGTGTTGGCAAGAAGGGTAATTCGTACTTCCTTCGCCGGCCTTATATTCCAGTAGATAAATTTCTTGAAGGTGGGACCCTCCCCACTGCAAAAGAAGCTCAGGCCATTGCAGATGATGTGTTCTCGCTCTTTATTAGTGAAGAGGTTGATAAGGTGGAGCTTCTGTACACCAAATTCGTCTCGTTGGTGAAGTCTGATCCAGTTATCCATACCTTGCTTCCGCTCTCACCCAAGGGAGAGATTTGTGATGTGAATGGTAATTGTGTGGATGCTGCGGAGGATGAATTGTTCAGATTGACGACTAAAGAAGGGAAATTGACTGTTGAGAGGGACACGGTGGTGACCAAGACAGTTGATTTCTCACCCATTTTGCAATTCGAGCAAGACCCAGTTCAGATTCTTGATGCCCTGCTGCCCCTATATCTGAACAGTCAGATTTTGAGAGCGTTGCAGGAGTCACTGGCGAGTGAGCTCGCTGCGAGGATGAGTGCAATGAGCAACGCAACAGATAATGCGGTCGAGTTGAAGAAGGACCTTTCTATGAAGTTCAATCGGCAGCGCCAGGCTAAGATCACTGGTGAGATATTAGAGATTGTTGCCGGGGCTGAGGCTCTTATATAG 1131 0.4757 MSCSNLTMWVSSKPSLSDPSSLSFRSLLSPFRLPSYNSTTTTPSRSLSPNPIQCGLRELRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLLTEDIDAPLTNIRTVKKVALVVVTGDRGLCGGFNNAIIKKAESRIAELKDLGLDYTIISVGKKGNSYFLRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDVNGNCVDAAEDELFRLTTKEGKLTVERDTVVTKTVDFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNAVELKKDLSMKFNRQRQAKITGEILEIVAGAEALI* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00335 376 Hamap ATP synthase gamma chain [atpG]. 53 375 IPR000131 GO:0015986|GO:0045261|GO:0046933
Eupl02g00335 376 NCBIfam ATP synthase F1 subunit gamma 55 375 IPR000131 GO:0015986|GO:0045261|GO:0046933
Eupl02g00335 376 Pfam ATP synthase 56 375 IPR000131 GO:0015986|GO:0045261|GO:0046933
Eupl02g00335 376 Gene3D ATP synthase, gamma subunit, helix hairpin domain 273 375 - -
Eupl02g00335 376 Gene3D ATP synthase, gamma subunit, helix hairpin domain 55 122 - -
Eupl02g00335 376 Coils Coil 56 76 - -
Eupl02g00335 376 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 55 375 IPR035968 GO:0015986|GO:0045261|GO:0046933
Eupl02g00335 376 Gene3D - 123 246 - -
Eupl02g00335 376 PRINTS ATP synthase gamma subunit signature 127 146 IPR000131 GO:0015986|GO:0045261|GO:0046933
Eupl02g00335 376 PRINTS ATP synthase gamma subunit signature 322 341 IPR000131 GO:0015986|GO:0045261|GO:0046933
Eupl02g00335 376 PRINTS ATP synthase gamma subunit signature 353 374 IPR000131 GO:0015986|GO:0045261|GO:0046933
Eupl02g00335 376 PRINTS ATP synthase gamma subunit signature 220 237 IPR000131 GO:0015986|GO:0045261|GO:0046933
Eupl02g00335 376 FunFam ATP synthase gamma chain, chloroplastic 54 121 - -
Eupl02g00335 376 PANTHER ATP SYNTHASE GAMMA CHAIN 5 375 IPR000131 GO:0015986|GO:0045261|GO:0046933
Eupl02g00335 376 CDD F1-ATPase_gamma 56 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Eupl02g00335 376 FunFam ATP synthase gamma chain, chloroplastic 272 375 - -
Eupl02g00335 376 FunFam ATP synthase gamma chain, chloroplastic 123 246 - -
Eupl02g00335 376 ProSitePatterns ATP synthase gamma subunit signature. 361 374 IPR023632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00335 Eupl-Chr2 3813894 3815633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00335 24 375 Primary Pumps ATPases AT1G15700 71.348 0.0 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00335 K02115 - nnu:104610940 638.647