Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00329 ATGGGTGACTCTGATGACACTTCTGACGATTCTAGAGATGTAACAAGTCAGGATTCTAAGGTGGAGTTCTCTGAAGACGAAGAAACTCTCATTGCTAGGATGTTTAATCTGGTTGGAGAGAGGTGGTCTCTAATTGCGGGGAGAATACCCGGAAGAAAGGCGGAAGAGATCGAGAAGTACTGGACTTCGAAGTATTCTTCATCAAGTGAATGA 213 0.4413 MGDSDDTSDDSRDVTSQDSKVEFSEDEETLIARMFNLVGERWSLIAGRIPGRKAEEIEKYWTSKYSSSSE* 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00329 70 Pfam Myb-like DNA-binding domain 20 62 IPR001005 -
Eupl02g00329 70 Gene3D - 22 70 - -
Eupl02g00329 70 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 21 66 - -
Eupl02g00329 70 CDD SANT 22 61 IPR001005 -
Eupl02g00329 70 FunFam MYB-like transcription factor 22 64 - -
Eupl02g00329 70 SUPERFAMILY Homeodomain-like 22 65 IPR009057 -
Eupl02g00329 70 ProSiteProfiles Myb-like domain profile. 15 65 IPR001005 -
Eupl02g00329 70 SMART sant 19 67 IPR001005 -
Eupl02g00329 70 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00329 Eupl-Chr2 3770806 3771206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00329 23 66 MYB Transcription Factor Family AT5G14750 50.000 1.71e-12 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl02g00329 Myb_DNA-binding 1.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00329 - - ming:122091983 110.923