Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00322 ATGGAAGGTATTGCTGTCAGAAGGGTCATTCCCTCGGACAACAGTTGCCTCTTTAATGCCGTTGGATATGTTATGGATCATAACAAACACAGAGCTCCTGAATTAAGACAGGTTATAGCTGCAACAGTGGCAAGTGATCCTGCAAAATACTCTGAAGCATTTCTCGGAAAACCAAATGAAGAATACTGTGCTTGGATTCTTGATTCTGAGAAGTGGGGAGGTGCTATTGAGCTTTCCATATTAGCGGATTTTTATGGACGCGAAATCGCAGCATATGACATCCAAACCACCCGATGCGATTTGTATGGTCAGGCAATGAAGTATCCAGAAAGGGTTATGCTGATTTATGATGGACTCCATTATGATGCCTTGGCTATGTCTCCCTCTGAGGGAGTTCCGGAGGAGTTTGACCAAACCATATTTAGTGTACGGAAGGATAGGACCATCGGGCCAGTTGAGGTGCTTGCTCTTAATCTTGTTAAGGATGCACGCAGGAAGAGGAGTTATACCGATACTTCCAATTTCACCTTGCGATGTGGGGTATGCCAAATTGGCGTCATCGGTCAGAAGGAGGCTGTGGAGCATGCACAGGCAACTGGCCATGCCAACTTTCAGGAATATAGATAA 627 0.453 MEGIAVRRVIPSDNSCLFNAVGYVMDHNKHRAPELRQVIAATVASDPAKYSEAFLGKPNEEYCAWILDSEKWGGAIELSILADFYGREIAAYDIQTTRCDLYGQAMKYPERVMLIYDGLHYDALAMSPSEGVPEEFDQTIFSVRKDRTIGPVEVLALNLVKDARRKRSYTDTSNFTLRCGVCQIGVIGQKEAVEHAQATGHANFQEYR* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00322 208 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
Eupl02g00322 208 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 6 206 - -
Eupl02g00322 208 Gene3D - 1 173 - -
Eupl02g00322 208 Pfam OTU-like cysteine protease 12 99 IPR003323 -
Eupl02g00322 208 SUPERFAMILY Cysteine proteinases 8 124 IPR038765 -
Eupl02g00322 208 FunFam ubiquitin thioesterase OTU1 1 173 - -
Eupl02g00322 208 CDD OTU_plant_OTU1_2-like 3 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00322 Eupl-Chr2 3696456 3704091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00322 1 208 C2H2 Transcription Factor Family AT1G50670 81.250 4.33e-129 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00322 K13719 - msin:131221280 387.497