Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00307 ATGGAGGAAGAAATGAAAGCTCAAGCCCAAGTGTGGAAACACATCTATGGCTTCGCCGAGTCATTCACTCTCAAATGCGCGATTCAACTCGGAATTGCTGACATACTCCACAAACACGGCCAACCCATGACTCTGTCCGAGTTAGCCTCTTCCCTCCCTCTCCCCTCGGTAAACACAGACCGATTCTACCGAATCATGCGCTACCTAGTCCACATGAAACTCTTCGACCTGGTTGACTCGGACGGGTCAAAGAAATACTCTCTCACCCCAGCATCAAAGCTCTTAATCAAAAGCCAAGAGAAGAGCCTCGCATCGTTCGTTCTTCTACAGTACTACGAGATGGACGCGTGGCATCATCTTAGCACTGCAGTTGAAGGTGATACGACGCCGTGGGAGAGATGTCACGGTGTGGACTATAGAGAGTACTTTGCGAAAGACTCGGTGGCGAATCAGTTGTTGAGTGATGCTATGACGAGTCACACGAGTATGGTGACTGATGCGCTCGTGAAGGGTTGTCAGAAAGCCAAGGTGCTTGATGGAGTGGGTTCCTTGATTGATGTCGGTGGGAGCACTGGGGTTGCTGCGCGTGCGATTGCTAAGTCGTTTCCGTATATAAAGTGTGCGGTGTTTGATCTGCCTCATGTGATAGCCACCGCGCCCGAGTGCGCCGAGGTGACTCGGATCGAAGGGGACATGTTCGTCTCTATCCCTAAGACTGATGTGGTGTTCATGAAGTCAGTACTGCACGACTGGGGGGATGAGGATTGTGTAAAGATATTGAAGAAATGCAAGGAGTCGATAGGAGAGAAGGGAGGGAAGGTTGTGATGGTGGAGATCGTGATGGATGTGGAATCAACGTACGATGAGTTCACGAGTGCGAGATTGGGTATGGAGATGGACATGCTGGTGACAGTTGGAGGAATGGAGAGAAGCGAGGAGCAGTGGCAGAAGCTCTTCAAAGCTGCCGGTTACACCCGATACAAGATCACCCCCATTGTCGCTATCGAATCCATCATCGAACTCTTTCCTTAG 1032 0.5068 MEEEMKAQAQVWKHIYGFAESFTLKCAIQLGIADILHKHGQPMTLSELASSLPLPSVNTDRFYRIMRYLVHMKLFDLVDSDGSKKYSLTPASKLLIKSQEKSLASFVLLQYYEMDAWHHLSTAVEGDTTPWERCHGVDYREYFAKDSVANQLLSDAMTSHTSMVTDALVKGCQKAKVLDGVGSLIDVGGSTGVAARAIAKSFPYIKCAVFDLPHVIATAPECAEVTRIEGDMFVSIPKTDVVFMKSVLHDWGDEDCVKILKKCKESIGEKGGKVVMVEIVMDVESTYDEFTSARLGMEMDMLVTVGGMERSEEQWQKLFKAAGYTRYKITPIVAIESIIELFP* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00307 343 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 106 340 IPR029063 -
Eupl02g00307 343 FunFam Coniferyl alcohol 9-O-methyltransferase 1 95 - -
Eupl02g00307 343 Pfam Dimerisation domain 23 70 IPR012967 GO:0046983
Eupl02g00307 343 SUPERFAMILY "Winged helix" DNA-binding domain 2 99 IPR036390 -
Eupl02g00307 343 Pfam O-methyltransferase domain 117 324 IPR001077 GO:0008171
Eupl02g00307 343 Gene3D Vaccinia Virus protein VP39 97 343 IPR029063 -
Eupl02g00307 343 CDD AdoMet_MTases 184 277 - -
Eupl02g00307 343 PIRSF O-mtase 1 343 IPR016461 GO:0008168
Eupl02g00307 343 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 12 343 IPR016461 GO:0008168
Eupl02g00307 343 PANTHER O-METHYLTRANSFERASE 5 324 IPR016461 GO:0008168
Eupl02g00307 343 Gene3D - 1 95 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00307 Eupl-Chr2 3546158 3548612 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00307 24 342 Monolignol Biosynthesis Gene Families AT5G54160 33.837 5.26e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00307 - K13383 nnu:104610908 573.548