Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00298 ATGGTTGGGGAGAGGGTGATGTGTTGTTTTCCGTGCTTTAAGTCGAGTGTCCATAGGAGGTCTTTGAAGAAGATCAAGCATCATAAACATGGGATAATTACATTAGCCTCGTTTGTCGAACATATTTCCTTCGGTTCCGACTGCAGCAAGCAAAAGATCTTAGCTGAAGAGATACTGAAATTTGGAAATGGGAACTTTGCCGCCTCAATCTTCACCTTCCGCGAGTTAGCAGCTGCAACTAACAACTTCAAACCAGAATGTCTAGTGGGTGAGGGTGGCTTTGGAAGGGTGTACAAAGGATGCATCCAGAGGACAAATCAGGATGTGGCTGTCAAGCAACTCGACAGGAACGGGTTGCAAGGAACCAGAGAGTTTCTTGTGGAAGTTTTGATGCTGAGTCTTCTTCACCACCCAAACCTTGTTAATCTGATTGGGTATTGTGCAGATGGATACCAAAGGATTTTAGTCTATGAGTACATGCCGTTGGGGTCTTTGGAGGATCACCTTCTTGATTTATCTCCAAATAAGAAGCCTTTAGAGTGGACTACAAGGATGAAAATAGCTGAAGGTGCAGCTAAAGGGCTTGAATACTTGCATGAGATGGCAAAACCGCCAGTTATCTATCGTGATTTCAAAGCATCAAATATATTATTGGATGAGAATTTCAATCCAAAGCTCTCTGATTTTGGGCTCGCCAAGCTGGGCCCGACTGGAGATAAGAGTTACGTGTCTACGAGGGTGATGGGGACCTATGGTTACTGTGCACCTGAGTATGCTCTGACAGGTCAATTAACAACAAGGTCCGATGTCTACAGTTTTGGAGTTGTGCTTCTGGAGATAATTACAGGAAGGAGAGCTATCGACAATTCAAAACCAAGATCTGAGCAAAACCTTGTTACTTGGGCACAACCACTGTTTAAAGACCGAAAGAAGTTTTCATTAATGGCCGATCCGTTGCTTAAAGGGAACTATCCCTTAAAGGGTCTCTACCAAGCTCTTGCAATTGCAGCCATGTGTCTCCAAGAGGAAGCTAGTACTAGGCCTTTGATCAGTGATGTTGTAACTGCTCTCGAGTACCTAGCCATACCGAAAAATGAGGATGGGGGCACTAAGGATACTCTGAGCTCATCTTCTCCTGATAGAAATAGCAGTGGAGATTTCAAAGGTGATGTTAGATCACATGGTAGTGGAGTAAGGGAACAAGTAAGTTTTGGTGGAGACGATGAATTGTAG 1233 0.4404 MVGERVMCCFPCFKSSVHRRSLKKIKHHKHGIITLASFVEHISFGSDCSKQKILAEEILKFGNGNFAASIFTFRELAAATNNFKPECLVGEGGFGRVYKGCIQRTNQDVAVKQLDRNGLQGTREFLVEVLMLSLLHHPNLVNLIGYCADGYQRILVYEYMPLGSLEDHLLDLSPNKKPLEWTTRMKIAEGAAKGLEYLHEMAKPPVIYRDFKASNILLDENFNPKLSDFGLAKLGPTGDKSYVSTRVMGTYGYCAPEYALTGQLTTRSDVYSFGVVLLEIITGRRAIDNSKPRSEQNLVTWAQPLFKDRKKFSLMADPLLKGNYPLKGLYQALAIAAMCLQEEASTRPLISDVVTALEYLAIPKNEDGGTKDTLSSSSPDRNSSGDFKGDVRSHGSGVREQVSFGGDDEL* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00298 410 MobiDBLite consensus disorder prediction 366 410 - -
Eupl02g00298 410 Gene3D Transferase(Phosphotransferase) domain 1 160 376 - -
Eupl02g00298 410 MobiDBLite consensus disorder prediction 369 384 - -
Eupl02g00298 410 FunFam Serine/threonine-protein kinase PBS1 160 375 - -
Eupl02g00298 410 PANTHER OS07G0668900 PROTEIN 29 367 - -
Eupl02g00298 410 Gene3D Phosphorylase Kinase; domain 1 68 159 - -
Eupl02g00298 410 Pfam Protein kinase domain 88 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00298 410 ProSiteProfiles Protein kinase domain profile. 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00298 410 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Eupl02g00298 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Eupl02g00298 410 FunFam probable serine/threonine-protein kinase RLCKVII 55 159 - -
Eupl02g00298 410 SUPERFAMILY Protein kinase-like (PK-like) 67 359 IPR011009 -
Eupl02g00298 410 CDD STKc_IRAK 89 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00298 Eupl-Chr2 3438663 3442396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00298 7 360 Glycoside Hydrolase AT3G07070 64.624 1.81e-163 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Eupl02g00298 Pkinase 5.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00298 - - nnu:104610959 592.423