Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00291 ATGAAGCTCTCACAGATTATTGGGCACCGATGTTCATTCATGGCGAGACCACTTCTGCTGTTGCTTTTATGTTTATTGGCTACAATGGAAGTCAGGGGTCAGATTCCAAATGCTACCTCTCCTTCATCTAGGCCGAGTGTTGTGAATTTGGGAGCTTTGTTTACTTTCAACTCGACCATCGGAAGAGTGGCAAAACCAGCAATTGCAGCTGCAGTTTCTGACGTGAATTCCGACCCAAGCATTCTTGCAGGGACGACACTGAATATTATCACGCAGGATACAAATTGCAGTGCATTTCTTGGAACCATTGAAGCTTTACAGCTATTGGAGAAAGATGTGGTTGCGATAATCGGCCCGCAATCCTCTGGAATAGCTCATGTGATCTCCCACGTTGTCAACGAACTTCATGTGCCACTTTTGACATTTGCGGCAACGGACCCCACTCTTTCTGCATTGCAATTTCCCTATATCCTCCGGGTGACGCAGAGTGATTACTTCCAGATGTACGCAATTGCTGATCTGGTTGAACACTATGGATGGAGGGAGGTTATCGCCATCTTTGTGGATGATGATTATGGGAGAAATGGGATATCTGTGCTAGGTGATGCCTTAGCAAAGACACGTTCCAAGATCTCTTACAAGGCCGCCTTCGCTCCTGCGGCCCCTAGAAGCGTAATTAATGACTTGTTGGCTAGAGTAAATATGATGGAATCTCGGGTTTATGTTGTACATGTAAATCCTGATTCCGGTCTAACAGTTTTCTCTGTTGCAAAGTATCTTGGGATGATGACCAACGGCTATGTTTGGATAGCAACGGATTGGCTCCCTTCTGTGTTAGATTCGTCGAAAGCAGAGGACCCTGCCACAATGAATCTCTTACAAGGGGTTGTTGCACTTCGCCATCACACCCCAGATTCTGATCTCAAAAAGAGTTTTATGTCTAGGTGGAGCGACTTACAACGGAGAGAGAATGCTACTAGTACAAGCTTGAATTCTTATGGGCTTTATGCTTATGATTCCGTTTGGTTATTTGCTCGTGCTCTTGACGAATTCTTGAATGAAGGAGGAAACATTTCTTTCTCTAATGATCCCAGGCTGCATGATGCAAATGGAAGCACACTTCACTTGGCGGCAGTCCGTAAATTTGAAGGAGGCCACAGATTACTTCAGAAACTGACCATGATGAACTTTACGGGTCTAACTGGTCAGATTCAGTTTGATCTGGATAAGAATTTGATTCAACCAGCATACGATGTACTTAACATTGCTCATACCAAGTCCCGCAGGATTGGATATTGGTCTAATTATTCAGGTCTCTCAGTTGTTGCTCCAGAAATCTTATATAGGAGCCCTCCAAACACTTCTACCAGTAGCCAACAGCTTTTCCGCGTAATATGGCCCGGTGAAACTATGGCAAGACCGCGTGGGTGGGTGTTTCCTAACAATGGGAAGCCTCTGAGAATTGGGGTTCCCAACCGAGTAGATTTTAAGCAATTTGTGGCGACAGAAAAGGGCTCCGACAGGGTAAAAGGACTCTGTATAGACGTGTTTGAGTCTGCGGTTAGCTTGTTGCAGTACCACGTTCCACACAAGTATATAGCGTATGGTGATGGTTTGAGAAATCCTAGTTACAATGAACTTGTGAAAATGGTTTCTGAAAATAAATTTGATGCAGTTGTTGGGGATGTAACCATTGTTACCAATAGGACGAAGATTGTGGATTTTACACAGCCTTACACTGCATCGGGCCTTGTTATAGTTGCTCCTGTCAGAGAGATAAAGTCAAGTGCTTGGTCCTTCCTAAAGCCATTTACTGTACAAATGTGGTGTGTCACAGGTGCATTCTCTTTCTTTGTGGGAGCTGTTGTTTGGATTCTCGAGCACCGGATAAACACTGAATTCCGTGGTCCACCAAGGAAACAGCTTGCAACATTTCTGTGGTTTAGTCTCTCAACAATGTTTTTTTCACACAGAGAGAACACCGTGAGCACCCTTGGACGTTTGGTGCTGATCATATGGCTCTTTGTAGTATTAATTATCAATTCAAGCTATACGGCTAGCTTGACATCAATCCTCACGGTGCAGCAGCTCTCATCACGTATTGAAGGGATCGACAGCTTAATCTCAAGTAAGGAGGTGATTGGGGTTCAGGATGGGTCATTTGCCAAGAACTATCTGATGGAAGAGCTCAGCATTGCAGAGTCCAGAATTATGATCCTGAAAAATCAGAAAGAGTATCTCAATGCTCTTGAGCATGGACCGAAAGATGGCGGGGTTGCTGCCATTGTCGACGAGCGTCCTTATCTAGACATCTTCTTGTCCAACACTAACTGCAAGTTCAGGATAGTGGGACAGGAGTTTACAAAAAGTGGATGGGGATTTGCTTTCCAAAGGGACTTTCCTCTCGCAGTTGACCTATCAACCGCTATCCTTAGACTCTCAGAGGATGGTGAACTACAAAGGATCCATGAGAAATGGTTACCCCACCCTGTGTGCTCCACACTATCCAATCAGGATGATTCGATCCGACTCTCTCTCAAGAGCTTTTGGGGCCTCTTCCTCATATGTGGCATCGCATGCTTCCTTGCTCTTCTTGTATTTTTTATTAGGGTGTTCTCTCAGTTTCGCAAGTATAGCCCGGAGGAGGAAGAAGAGATCGAACTGGAAAGATCCCACCCAAGTTCTCGACCCTCGACCAGCCTGACTACCTTCAGGGGCTTAGTTGATTTTGTTGATATGAAGGAGAAAGAGATCAAGGACAAGCTGAAGAGGAAGACAAGTAATAGTAAAACCATACCTCAGAGCCCAGATGGACAGCCCTGTTCACCTTCTTAG 2835 0.4497 MKLSQIIGHRCSFMARPLLLLLLCLLATMEVRGQIPNATSPSSRPSVVNLGALFTFNSTIGRVAKPAIAAAVSDVNSDPSILAGTTLNIITQDTNCSAFLGTIEALQLLEKDVVAIIGPQSSGIAHVISHVVNELHVPLLTFAATDPTLSALQFPYILRVTQSDYFQMYAIADLVEHYGWREVIAIFVDDDYGRNGISVLGDALAKTRSKISYKAAFAPAAPRSVINDLLARVNMMESRVYVVHVNPDSGLTVFSVAKYLGMMTNGYVWIATDWLPSVLDSSKAEDPATMNLLQGVVALRHHTPDSDLKKSFMSRWSDLQRRENATSTSLNSYGLYAYDSVWLFARALDEFLNEGGNISFSNDPRLHDANGSTLHLAAVRKFEGGHRLLQKLTMMNFTGLTGQIQFDLDKNLIQPAYDVLNIAHTKSRRIGYWSNYSGLSVVAPEILYRSPPNTSTSSQQLFRVIWPGETMARPRGWVFPNNGKPLRIGVPNRVDFKQFVATEKGSDRVKGLCIDVFESAVSLLQYHVPHKYIAYGDGLRNPSYNELVKMVSENKFDAVVGDVTIVTNRTKIVDFTQPYTASGLVIVAPVREIKSSAWSFLKPFTVQMWCVTGAFSFFVGAVVWILEHRINTEFRGPPRKQLATFLWFSLSTMFFSHRENTVSTLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSSRIEGIDSLISSKEVIGVQDGSFAKNYLMEELSIAESRIMILKNQKEYLNALEHGPKDGGVAAIVDERPYLDIFLSNTNCKFRIVGQEFTKSGWGFAFQRDFPLAVDLSTAILRLSEDGELQRIHEKWLPHPVCSTLSNQDDSIRLSLKSFWGLFLICGIACFLALLVFFIRVFSQFRKYSPEEEEEIELERSHPSSRPSTSLTTFRGLVDFVDMKEKEIKDKLKRKTSNSKTIPQSPDGQPCSPS* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00291 944 Gene3D - 726 830 - -
Eupl02g00291 944 CDD GluR_Plant 484 827 - -
Eupl02g00291 944 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 48 890 IPR015683 -
Eupl02g00291 944 FunFam Glutamate receptor 163 319 - -
Eupl02g00291 944 Pfam Receptor family ligand binding region 65 423 IPR001828 -
Eupl02g00291 944 MobiDBLite consensus disorder prediction 922 944 - -
Eupl02g00291 944 Pfam Ligand-gated ion channel 829 860 IPR001320 GO:0015276|GO:0016020
Eupl02g00291 944 PIRSF IGluLR_plant 12 941 IPR017103 -
Eupl02g00291 944 Gene3D - 598 725 - -
Eupl02g00291 944 FunFam Glutamate receptor 481 597 - -
Eupl02g00291 944 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 121 149 - -
Eupl02g00291 944 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 61 77 - -
Eupl02g00291 944 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 337 349 - -
Eupl02g00291 944 FunFam Glutamate receptor 723 830 - -
Eupl02g00291 944 SMART GluR_14 487 829 IPR001320 GO:0015276|GO:0016020
Eupl02g00291 944 Gene3D - 163 439 - -
Eupl02g00291 944 CDD PBP1_GABAb_receptor_plant 49 443 IPR044440 -
Eupl02g00291 944 Gene3D - 67 414 - -
Eupl02g00291 944 FunFam Glutamate receptor 597 727 - -
Eupl02g00291 944 Gene3D - 481 597 - -
Eupl02g00291 944 Pfam Bacterial extracellular solute-binding proteins, family 3 543 828 IPR001638 -
Eupl02g00291 944 SUPERFAMILY Periplasmic binding protein-like II 461 830 - -
Eupl02g00291 944 SUPERFAMILY Periplasmic binding protein-like I 42 478 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00291 Eupl-Chr2 3373611 3381747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00291 44 800 Ion Channels AT1G05200 66.446 0.0 1061
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00291 K05387 - ming:122081886 1381.7