Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl02g00280 | ATGCCAGCCGGAATAATGATTCCGGCTAGACACGTGCCGCCGATGATGGGAAGGAACGGAAAGATAGCTGGATTTGGGTCGTCTTCGGGGCTTACGCTCGGTCAGTCTAACATGTTGGACGGTCAACACATGCCGCTCGAGATGACCCAAAACACCCCCGAGAGCGAAATGGCGAAGATCAGAGATGATGAATTCGAGAGCAAATCCGGCAGTGAAAACCTCGAAGGCGCTTCCGGTGACGATCAAGATCCCAATCAACGTCCACGAAAGAAGCGTTACCATCGCCATACCCAGCATCAAATCCAAGAAATGGAAGCTTTTTTCAAAGAATGCCCTCATCCAGATGACAAGCAAAGGAAGGAGCTGAGCCGTGAACTAGGGTTAGAGCCTTTGCAAGTCAAATTTTGGTTCCAAAATAAGCGTACCCAAATGAAGAACCAGCATGAACGCCATGAAAACTCACAGCTGAGATCCGAGAACGAAAAGCTCCGGGCAGAGAATATGAGGTACAAAGAAGCGCTTAGTACCGCTTCATGTCCCAACTGTGGAGGCCCAACAGCTATTGGTGAGATGTCTTTTGACGAGCATCATTTGAGAATTGAGAACGCTCGACTAAGAGAAGAGATTGACAGGATTTCCGGTATAGCTGCAAAATATGTTGGTAAACCTATGGGTTCGTATCCTCTTCTTTCTTCTCCGATTCCTCCCCGTTCGCTCGACCTTGGGGTTGGAAACTTTGGGGTGCAACCAGGTGTTGGTGGGGAGATTTTCGGGGCGGGCGATCTTCTTAGGTCGGTCTCTGTGCCTACTGAGGCGGATAAGCAGATGATCATTGAACTTGCAGTTGCAGCAATGGAAGAGCTAATCAGAATGGCTCAACTCGGGGAACCCTTGTGGCTTCCAGCCGGCCTCGACGATGCTACCGAGATACTATGCGAAGATGAATACATCCGGACATTCCCAAGGGGAATTGGGCCAAAACCCTTTGGGTTGAAATCCGAAGCTTCTCGAGAGAATGCTGTTGTTATCATGAATCATATTAACCTTGTTGAGATCCTTATGGATGTGAATCAATGGTCAAGTGTTTTTTCGAGTATAGTCTCAAGAGCCATAACAATAGAAGTCTTATCAACAGGAGTAGCGGGAAACTACAATGGAGCCCTGCAAGTGATGACAGCAGAATTCCAAGTCCCTTCACCTCTTGTTCCGACTCGTGAGAGTTTGTTCGTGAGGTACTGCAAACAACATGCCGATGGAACTTGGGCAGTGGTTGATGTTTCCTTGGACCATTTACGCCCTGGCCCAGTAATGAGATGTCGAAGAAGGCCATCAGGCTGTTTAATCCAAGAATTGCCAAATGGTTACTCGAAGGTTATGTGGGTTGAACATGTAGAAGTAGATGACAGAGCTGTTCACAGTATATACAAATCACTAGTTAACTCTGGCCTTGCATTTGGCGCAAAGCGTTGGGTTGCTACCTTGGATCGACAATGCGAACGCCTTGCAAGTGTAATGGCTAGTAACATTCCTGCTGGAGATGTTGGTGTGATAACGAGTCATGAAGGTAAAAAAAGTATGTTGAAGCTAGCTGAGAGGATGGTGGTGAGTTTTTGTGCTGGAGTGAGTGCCTCTACTGCTCACACATGGACTACATTATCTGGAAGTAGCGCTGAAGATGTGAGGGTCATGACCAGGAAGAGCATAGATGATCCAGGCAGGCCCCCTGGTATTGTGCTAAGTGCAGCCACTTCCTTCTGGCTTCCAGTCCCACCAAAGAGAGTTTTTGATTTCCTTCGGGATGAGAACTCTCGAAATGAGTGGGATATCCTGTCAAATGGTGGTGTCGTTCAAGAAATGGCCCACATTGCTAATGGCCGTGATCCTGGCAACTGTGTCTCTTTACTGCGCGTGAATAGTGCAAATTCCAGCCAAAGCAACATGCTGATATTACAAGAGAGTTGCACAGACTCAACGGGCTCTTTCGTAATTTATGCTCCAGTTGATATCCATGCAATGAATGTGGTTCTAAATGGGGGAGACCCAGATTATGTAGCTCTCCTGCCCTCAGGGTTTGCCATACTCCCTGATGGGCCGACAATGCATGGAGGTGGAATTGCTGAGGTTGGGTCTGGTGGATCTCTTCTGACTGTTGCATTTCAGATCTTGGTTGATTCGGTTCCGACGGCAAAACTCTCTCTCGGATCAGTGGCAACTGTAAACAGCCTCATTGCTTGCACTGTTGAAAGGATCAAGGCCGCGGTTACATGCGACAATGCATGA | 2280 | 0.4789 | MPAGIMIPARHVPPMMGRNGKIAGFGSSSGLTLGQSNMLDGQHMPLEMTQNTPESEMAKIRDDEFESKSGSENLEGASGDDQDPNQRPRKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSENEKLRAENMRYKEALSTASCPNCGGPTAIGEMSFDEHHLRIENARLREEIDRISGIAAKYVGKPMGSYPLLSSPIPPRSLDLGVGNFGVQPGVGGEIFGAGDLLRSVSVPTEADKQMIIELAVAAMEELIRMAQLGEPLWLPAGLDDATEILCEDEYIRTFPRGIGPKPFGLKSEASRENAVVIMNHINLVEILMDVNQWSSVFSSIVSRAITIEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESLFVRYCKQHADGTWAVVDVSLDHLRPGPVMRCRRRPSGCLIQELPNGYSKVMWVEHVEVDDRAVHSIYKSLVNSGLAFGAKRWVATLDRQCERLASVMASNIPAGDVGVITSHEGKKSMLKLAERMVVSFCAGVSASTAHTWTTLSGSSAEDVRVMTRKSIDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENSRNEWDILSNGGVVQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLILQESCTDSTGSFVIYAPVDIHAMNVVLNGGDPDYVALLPSGFAILPDGPTMHGGGIAEVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVTCDNA* | 760 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl02g00280 | 759 | CDD | homeodomain | 89 | 148 | IPR001356 | GO:0003677 | |
Eupl02g00280 | 759 | SMART | START_1 | 279 | 500 | IPR002913 | GO:0008289 | |
Eupl02g00280 | 759 | SMART | HOX_1 | 88 | 151 | IPR001356 | GO:0003677 | |
Eupl02g00280 | 759 | MobiDBLite | consensus disorder prediction | 25 | 39 | - | - | |
Eupl02g00280 | 759 | ProSiteProfiles | 'Homeobox' domain profile. | 87 | 147 | IPR001356 | GO:0003677 | |
Eupl02g00280 | 759 | CDD | START_ArGLABRA2_like | 274 | 499 | - | - | |
Eupl02g00280 | 759 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Eupl02g00280 | 759 | Gene3D | - | 344 | 502 | IPR023393 | - | |
Eupl02g00280 | 759 | FunFam | Homeobox-leucine zipper protein HDG1 | 78 | 163 | - | - | |
Eupl02g00280 | 759 | Pfam | START domain | 280 | 500 | IPR002913 | GO:0008289 | |
Eupl02g00280 | 759 | MobiDBLite | consensus disorder prediction | 51 | 97 | - | - | |
Eupl02g00280 | 759 | Coils | Coil | 146 | 173 | - | - | |
Eupl02g00280 | 759 | SUPERFAMILY | Bet v1-like | 521 | 751 | - | - | |
Eupl02g00280 | 759 | Pfam | Homeodomain | 90 | 146 | IPR001356 | GO:0003677 | |
Eupl02g00280 | 759 | SUPERFAMILY | Homeodomain-like | 77 | 147 | IPR009057 | - | |
Eupl02g00280 | 759 | Gene3D | - | 77 | 164 | - | - | |
Eupl02g00280 | 759 | ProSitePatterns | 'Homeobox' domain signature. | 122 | 145 | IPR017970 | GO:0000981|GO:0006355 | |
Eupl02g00280 | 759 | FunFam | Homeobox-leucine zipper protein GLABRA 2 | 279 | 499 | - | - | |
Eupl02g00280 | 759 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 | 86 | 754 | IPR042160 | - | |
Eupl02g00280 | 759 | MobiDBLite | consensus disorder prediction | 56 | 70 | - | - | |
Eupl02g00280 | 759 | SUPERFAMILY | Bet v1-like | 270 | 502 | - | - | |
Eupl02g00280 | 759 | ProSiteProfiles | START domain profile. | 270 | 503 | IPR002913 | GO:0008289 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl02g00280 | Eupl-Chr2 | 3272662 | 3277743 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl02g00280 | 37 | 757 | Homeobox Transcription Factor Family | AT4G04890 | 77.371 | 0.0 | 1154 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-HD-ZIP | Eupl02g00280 | START | 1e-56 | CL0209 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl02g00280 | K09338 | - | msin:131221379 | 1356.66 |