Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00278 ATGCAGGCCTCTGGCTGCTTTTCCTTTTCCTTCTTCTCTCTTCTCATCTTCTTCTCTTCCTTGATCTCCTCCTCCTTGGCCCTCTCTACTGTGGAAGCTTCTTTCATCGCTCGTCGTCAGCTATTAAGCCTCCCTCAGAACGGAGACTTACCCGATGACTACGAATTTGAGGTTAATCTTAAGGTTGCTTTTGCTAATTCAAGGCTCCGACGAGCTTATATAGCCTTGCAAGCATGGAAGAAAGCTATCTTCTCTGACCCTTTTAATACCACTAGTAATTGGGTTGGTCCAAATGTATGTGCTTATACTGGTGTCTTCTGCGCACCGGCCCTCGATGATCCCACTGTGAGTGTTGTCGCTGGTGTCGATCTTAACACTGCCGATATCGCTGGGTTCCTCCCTGTCGAGCTTGGCCTATTGACTGATCTTGCTCTCTTCCACATTAATTCTAATCGTTTTTGTGGAATTATCCCAAAGAGCTTCTCTAGATTGTCACTTATCTATGAATTGGATGTCAGCAATAACCGCTTCGTCGGTCCATTTCCTAAGGTAGTTCTGTCATTGCCTGATCTCAAGTATTTGGATATTAGATACAATGATTTTGAAGGATCTCTACCGTCGGAACTCTTCGAGAAGGAGCTCGATGCGTTGTTCGTAAACGATAATCGATTCGAGTCCCACATACCGGAAAATCTCGGGAACTCACCGGTGTCGGTTGCGGTGTTCGCGAATAACAAATTTAGTGGGTGTATTCCTAGCAGCATTGGTAAGATGGTGAACTCGTTGGATGAGATTGTGTTCTTGAACAACGACCTCTCTGGTTGTTTGCCTCCGGAAATAGGCTTGCTTTCAAATGTAACTGTGTTTAGTGCTGCGTCAAATTCGTTGACCGGGACCTTGCCAAGGAGCTTTTCGGGTTTGAAACACGTGGAGGTTTTTGATATCTCGCATAACGTGCTGACTGGATTCGTTCCAGAGAAGATTTGCAAGTTGCCTAGCTTGGCTAGTTTTATATTTTCTCATAACTATTTCAAGGGTGAAGCACCGGAGTGCGTGCCATCGTCGACCGCAGATGTTTTCTTGGATGATAAGAGTAACTGTTTGCCTGATCGGCCGAAACAAAAGACGGCCAAGATGTGTGTGCCAGTAGTGAGTCGACCAGTGGATTGTAGTAAATCAAAGTGTGGGTCCCCATCGTCACCATCTAGACCTGCGCCACCGGTTCCAACTCCTTCAACACCGAAACCGCAACCACAACCATCATCACCCCCGTCTTCTGCACCAGTCTTTAACCCACCGTCACCGACGCCGAAACCTTCCCCAACGCCTGCACCGGTCGCGAACCCACCGTCACCGACGCCGAAACCTTCCCCAACGCCTACACCGATCTCGATCCCACCGTCACCGATGCTGAATCCTTCCCCAACGCCTGCACCGGTCTCGATCCCACCGTCACCGTCACCGACGCCGAAACCTTCCCCAACGCCTGCACCGGTCTCGACCCCACCGTCACCGTATCCACAACCGACTCCTGCACCTGTCTCGACCCCACCGTCGCCGCAGCCACAACCGACACCTGCACCGGTGTCGACCCCACCGTCGCCGCAGCCACAACTGACACCTGCACCGGTGTCGACCCCACCGTCTTCACAGCCTGAACCCTCTCCGGCGCCTACACCCACCCCAGTGCCAGTTTACAACCCTCCACCACCCTCACCAACACGCCAACCAGGAGTACCACCACCAGATGAGTACTCCCCCGTTGAAAGGCTTCGCTCTCCTCCTCCCCCTGTTATATCTTCACCTCCACCAGTTCAGTTGTCCCCACCACCACCAGTATACTCCCCACCACCACCGGTGAACTCACCACCCCCACCCCCAGTTCAATCACCTCCACCTCCACCTCCACCTCCACCTGTATCCTCTCCTCCACCACCACCCATATACTCTCCACCCCCTCCACCACCGGTGCAGTCTCCACCACCACCAGTTCAATCTCCTCCACCACCAGTGCAATCTCCCCCACCACCAGTGTACTCTCCCCCACCACCAGTGTACTCTCCTCCTCCACCACCAGTTAACTCTCCACCACCACCAGTTTACTCCCCTCCTCCACCACCAGTTAACTCTCCACCACCACCAGTTTACTCCCCTCCACCACCACCACCAGTTAACTCTCCACCGCCACCAGTTTACTCCCCTCCACCACCAGTTTACCCTCCACCACCACCACCAGTCCAGTCTCCTCCTCCACCAGTGCAATCACCACCGCCACCAGTTCAATCTCCACCACCACCTGTCCAATCTCCGCCTCCACCCGTCTACTCACCCCCACCACCATCGAGACAATCCCCACCACCACCACCACCACCACCATCTACATCTCCTCCTCCTCCTCCTACTCCTGTCTTCTCCCCACCGCCGACTCCTTCAGGCGACATCATCCTCCCACCAAACTTTGGATTCCAATACTCATCACCGCCTCCACCGATATTCCCAGGCTATTAA 2508 0.5331 MQASGCFSFSFFSLLIFFSSLISSSLALSTVEASFIARRQLLSLPQNGDLPDDYEFEVNLKVAFANSRLRRAYIALQAWKKAIFSDPFNTTSNWVGPNVCAYTGVFCAPALDDPTVSVVAGVDLNTADIAGFLPVELGLLTDLALFHINSNRFCGIIPKSFSRLSLIYELDVSNNRFVGPFPKVVLSLPDLKYLDIRYNDFEGSLPSELFEKELDALFVNDNRFESHIPENLGNSPVSVAVFANNKFSGCIPSSIGKMVNSLDEIVFLNNDLSGCLPPEIGLLSNVTVFSAASNSLTGTLPRSFSGLKHVEVFDISHNVLTGFVPEKICKLPSLASFIFSHNYFKGEAPECVPSSTADVFLDDKSNCLPDRPKQKTAKMCVPVVSRPVDCSKSKCGSPSSPSRPAPPVPTPSTPKPQPQPSSPPSSAPVFNPPSPTPKPSPTPAPVANPPSPTPKPSPTPTPISIPPSPMLNPSPTPAPVSIPPSPSPTPKPSPTPAPVSTPPSPYPQPTPAPVSTPPSPQPQPTPAPVSTPPSPQPQLTPAPVSTPPSSQPEPSPAPTPTPVPVYNPPPPSPTRQPGVPPPDEYSPVERLRSPPPPVISSPPPVQLSPPPPVYSPPPPVNSPPPPPVQSPPPPPPPPPVSSPPPPPIYSPPPPPPVQSPPPPVQSPPPPVQSPPPPVYSPPPPVYSPPPPPVNSPPPPVYSPPPPPVNSPPPPVYSPPPPPPVNSPPPPVYSPPPPVYPPPPPPVQSPPPPVQSPPPPVQSPPPPVQSPPPPVYSPPPPSRQSPPPPPPPPSTSPPPPPTPVFSPPPTPSGDIILPPNFGFQYSSPPPPIFPGY* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00278 835 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 10 572 - -
Eupl02g00278 835 MobiDBLite consensus disorder prediction 390 835 - -
Eupl02g00278 835 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 257 348 - -
Eupl02g00278 835 PRINTS Pistil-specific extensin-like signature 718 741 IPR003882 -
Eupl02g00278 835 PRINTS Pistil-specific extensin-like signature 753 771 IPR003882 -
Eupl02g00278 835 PRINTS Pistil-specific extensin-like signature 512 523 IPR003882 -
Eupl02g00278 835 SUPERFAMILY L domain-like 74 359 - -
Eupl02g00278 835 Gene3D Ribonuclease Inhibitor 72 371 IPR032675 -
Eupl02g00278 835 FunFam Leucine-rich repeat extensin-like protein 1 73 234 - -
Eupl02g00278 835 MobiDBLite consensus disorder prediction 400 814 - -
Eupl02g00278 835 Pfam Leucine rich repeat 292 343 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00278 Eupl-Chr2 3233248 3236437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00278 5 396 Trihelix Transcription Factor Family AT3G19020 66.921 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00278 - - vvi:100255508 588.956