Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00244 ATGGATCCTCTGTGTGAGGTCTGTGGAATGGCGAGGGCAGTGGTTTATTGCAGATCAGACACTGCCCGTCTTTGCTTGAACTGTGATGCCCATGTTCACTCTGCAAACGCTCTCTCCGGTCGTCATCTTCGTTCACTCATATGCGACAGATGCCACTCACAGCCTGCGATAGTTCGGTGCTTGGAAGATAAAATGTCTCTCTGTCAAAGCTGTGATTGGAACGGCCACGGCTGCTCAGGGCCCGGGCATCCACGACATGTGGTTAATTGCTATTCAGGTTGTCCTTCTCCGCCAGACCTCTTTAGGATCTCTTCTTCTGTTATCGATGCTTCCTCTCTGAGTGAAGTTGATACTAAACGGGGACTACCCGGTATGGTGTCGATAAAGGAGAATTGTGTTAGTAACTGTTGGAAACCTGGAGAGAATGGGAGCTCGGTTGGGTTAGCAATCGTTCCACCCAATGTGAATTGTGTTAATTACAAATCTCAGAAGGGTCCGTCTTCTGGGATTCCACCCAATGTGAATCCTGTACCAGACAATGAACATCAATTACCGATCTTTCCGAAGGAGACGGACCTGTCAAAGAGCTGTTCTCCATTTAAGGATTTCAGAATATGTGATGGTGATGATCTATATGAAGGTTTAAACATGAATGATGTTGGGTTGGACTTTGAGAACAGTGATGAGAAATTTGGCTGCTCACAGGGCCTTCCTGGATTCATTTTTGAGGATGTTGGAATGGCTCGCTCATTTGTGGAGAAAAACTTATTGGTTGTTGATTCTAGTGGTCCCAATGACAATGCCATAGAGGCATCATCATCTGGGCAACATGATTGCTTAGCTCTTCAATCTTCTTGTATTGCTGGGTCTGGCCGAGCGGTGCAGGGTGTAAATGGCAGTGCAGTAATTCTAGATTCTAGTGGCAACAGAAACATCAACCTATGCTTTCCTACTGGACAAGTCCATTCAAGTATGTCACTCTCACTCTCCAACCTCACTGGCGAAAGCAGTTGTGCTGATTATCAAGATTGTGGAGTATCACCAATATTTTTAACATGTGAATCACCATGGGATTCAAATTTGGAATCTAATTGCCCACAAGAGAGGGACAGCGCAATGATGAGACACGACGAAAAAAAGAGAAACCGAACGTTTCGGAAACAAATAAGATCTGCTTCTCGTAAAGCCAGAACAGATACTAGAAAACGTGTCAAAGGTCAATTTGTGAAGGTTGGTGAAGCTTATGACTTTGATCCTCTTGAAACAAGAAACTGCTAA 1278 0.4476 MDPLCEVCGMARAVVYCRSDTARLCLNCDAHVHSANALSGRHLRSLICDRCHSQPAIVRCLEDKMSLCQSCDWNGHGCSGPGHPRHVVNCYSGCPSPPDLFRISSSVIDASSLSEVDTKRGLPGMVSIKENCVSNCWKPGENGSSVGLAIVPPNVNCVNYKSQKGPSSGIPPNVNPVPDNEHQLPIFPKETDLSKSCSPFKDFRICDGDDLYEGLNMNDVGLDFENSDEKFGCSQGLPGFIFEDVGMARSFVEKNLLVVDSSGPNDNAIEASSSGQHDCLALQSSCIAGSGRAVQGVNGSAVILDSSGNRNINLCFPTGQVHSSMSLSLSNLTGESSCADYQDCGVSPIFLTCESPWDSNLESNCPQERDSAMMRHDEKKRNRTFRKQIRSASRKARTDTRKRVKGQFVKVGEAYDFDPLETRNC* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00244 425 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 414 - -
Eupl02g00244 425 CDD Bbox1_BBX-like 47 80 - -
Eupl02g00244 425 SMART bboxneu5 1 47 IPR000315 GO:0008270
Eupl02g00244 425 SMART bboxneu5 48 88 IPR000315 GO:0008270
Eupl02g00244 425 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Eupl02g00244 425 CDD Bbox1_BBX-like 4 47 - -
Eupl02g00244 425 ProSiteProfiles CCT domain profile. 369 411 IPR010402 GO:0005515
Eupl02g00244 425 Pfam CCT motif 369 411 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00244 Eupl-Chr2 2969755 2976888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00244 1 419 C2C2-CO-like Transcription Factor Family AT3G21880 38.106 1.14e-85 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Eupl02g00244 CCT 4.3e-12 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00244 - - cic:CICLE_v10015305mg 482.641