Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00243 ATGTGCAGGGGTAGAGAGGAAGAGAGAAACCAGAGCAGCTTTAGCCTGCCTGAGTTGTCCACTGAGGTTGTTTCAGGTCATGTGACCATGGGCTCAATATTCTGCGAGCTCTGCAGTTCACGAGCTTCGTTATATTGTCAAGCAGACGACGCGTTTCTATGCCGGAAATGTGACAAACAAGTCCATGGAGCTAATTTCTTGGCATTAAGGCATGTTAGATGTCTGCTCTGTTATACGTGTCAAAATCTTACGGGACGGTATTTTATTGGATCTTCATTCAAATTGGCAGTTCCAATTAACAGGAAGAGAAGGCAGTGTAATTCAAAGCAAGGGTCAGTTTTGTGGTTTGATTGA 354 0.4407 MCRGREEERNQSSFSLPELSTEVVSGHVTMGSIFCELCSSRASLYCQADDAFLCRKCDKQVHGANFLALRHVRCLLCYTCQNLTGRYFIGSSFKLAVPINRKRRQCNSKQGSVLWFD* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00243 117 ProSiteProfiles Zinc finger B-box type profile. 30 76 IPR000315 GO:0008270
Eupl02g00243 117 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 34 99 - -
Eupl02g00243 117 Pfam B-box zinc finger 34 71 IPR000315 GO:0008270
Eupl02g00243 117 SMART bboxneu5 30 76 IPR000315 GO:0008270
Eupl02g00243 117 CDD Bbox1_BBX-like 35 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00243 Eupl-Chr2 2968219 2968708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00243 1 98 C2C2-CO-like Transcription Factor Family AT3G21890 47.525 1.59e-22 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl02g00243 zf-B_box 4.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00243 - - vvi:104880899 132.88