Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00240 ATGAATTCTCTCTGTGTGTCGGAAAACTTTCGACTGCTCTTCCTTGCTTCCCTCCTAGCCTTGTTTTTTGGTCCTAGTTATGCCGACCCCAGTCGGGACAACCCTCCCTATACTAATTGCTCAGGTACTGCTAATTTCACAGATAGTATGTTTGAAAATAATCTCAATCAAACCCTCCAATTCCTGTCCTCTTATGCTTCTATCCCCCACTTCAACAGCACTTCCACAGGCGATGAACCAGATAGAGTCTATGGCAGCTTCCTCTGCTTCTATAGAAAGGCCACAGCCAATGACCCTGACAATTGCAAGAGTTGTGTGGAAACCGCAGTTCATCGCATCAGACAATTCTGTCCCACCAGTAAAGAAGCAATTGTATGGGAAGAACACTGCCAATTGCGTTACTCTAACCGAAGTTTCTTCAGCCTTATGGAGAATACTACATATAAGCCTCAATATAACCATATAAATAATTCAGACCCACAGAGATTTAGTTCTGTTGTGAGGAAGCTGATGGATAACCTTTCTGAGCAGGCCGCGTTCGGTGATACACACATGTTTGAGAATGGAAAATCTGAATTTACGAAAATTGATACAGTTTATGGTCTTGTGCAGTGCACTGAGGACCTATCTGGATATAACTGTAGTAGATGCCTCCAAAGTACCCTAACATATATTCTAAGTTACTGCAATTTTTCTCGAGGCGCAAGAGTTTTTGGTACAAGCTGCTACTTAAGGTACGAGTTATACGATTTTGTGGCAGGTGATCCTCCATCAACCAATACGCCTAAGGAAAGTGACCGAAGGAAAGTATCAACACCTGTAATCATTACTATTGCAGTGGCGTGTGTCGTTGTAGTTCTCTTGGGTTCCTGCCTCTGCTATCTTGTGGGGAGGAAGAGACCGCGAAAAGAGAAAAAAAATTGTATCAGTGAAGCCTCGTTACGTGGTATGGGGGCTCCCAACAGCACAAATTTCTCGCACCAAAACATGCAAGGAAGGGATCAAATGAAACCTCAGGATTTTCCCTTGATCAGTTTAGCTACTATACATACAGCAACAAACAACTTCTCTGATTTAAATAAACTAGGACAAGGTGGGTTCGGCCCCGTTTACAAGGGTGCACTGCCTGATGGAAAGGAAGTCGCTGTTAAGAGACTTTCAAGCATTTCTGAGCAAGGTTCAGAGCAATTCATGAATGAAGTTTTACTAATAATGAAACTTCAACACAAAAATCTTGTGAGGCTCCTCGGTTGTTGCATAGAAGCAGAGGAAAAGATTCTCGTCTATGAATACATGGCCAACAGCAGCCTTGATGTCTTCCTCTTCGATCCAAAGAGTCGCCCACTACTTGACTGGGGAAAACGATTTAACATTGTTACTGGAATTGCTCGGGGCCTTCTTTACCTTCACCAGGATTCGCGACTTAGAATCATTCACAGGGACGTAAAAGCTAGCAATGTGTTGTTGGACCATGATATGAACCCAAAGATCTCAGACTTTGGCATGGCAAGAATTTTTGGAGGAAACATAGGTGAAGCTAATACTGATATAATCGTCGGAACTTATGGATACATGGCTCCAGAGTATGCTATGGAGGGACTATATTCCATAAAGTCTGATGTTTTTAGCTTTGGAGTTCTCTTGTTAGAGATTGTCACTGGGAAAAGGAATGCTGGCTTCCATCTCTCCGGACGAGCTCCAAGCCTCCTAGTATATGCTTGGCGATTATGGAATGAAGGGAAAGGATTGGAATTGATGGATCCATTGTTAACTGAACCATATTCAACAATTGAATTTTTGAGATGCATCCACATTGGATTGTTGTGTGTTCAAGAAGATGCAGTAAATAGACCTAGCATGTCATCAGTTGTTGTCATGTTGGGAACTGAATCTGCAGCACTTAGTCAACCTCAACAACCCGCATTTTCTGTGGGGAGATTTGTCATCCAATCTGATCAATCCTTAGATTGTACTATCAATGAGTTAACTGTTTCGGGTGTTACACCTCGCTAA 2013 0.4252 MNSLCVSENFRLLFLASLLALFFGPSYADPSRDNPPYTNCSGTANFTDSMFENNLNQTLQFLSSYASIPHFNSTSTGDEPDRVYGSFLCFYRKATANDPDNCKSCVETAVHRIRQFCPTSKEAIVWEEHCQLRYSNRSFFSLMENTTYKPQYNHINNSDPQRFSSVVRKLMDNLSEQAAFGDTHMFENGKSEFTKIDTVYGLVQCTEDLSGYNCSRCLQSTLTYILSYCNFSRGARVFGTSCYLRYELYDFVAGDPPSTNTPKESDRRKVSTPVIITIAVACVVVVLLGSCLCYLVGRKRPRKEKKNCISEASLRGMGAPNSTNFSHQNMQGRDQMKPQDFPLISLATIHTATNNFSDLNKLGQGGFGPVYKGALPDGKEVAVKRLSSISEQGSEQFMNEVLLIMKLQHKNLVRLLGCCIEAEEKILVYEYMANSSLDVFLFDPKSRPLLDWGKRFNIVTGIARGLLYLHQDSRLRIIHRDVKASNVLLDHDMNPKISDFGMARIFGGNIGEANTDIIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLLEIVTGKRNAGFHLSGRAPSLLVYAWRLWNEGKGLELMDPLLTEPYSTIEFLRCIHIGLLCVQEDAVNRPSMSSVVVMLGTESAALSQPQQPAFSVGRFVIQSDQSLDCTINELTVSGVTPR* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00240 670 CDD STKc_IRAK 362 627 - -
Eupl02g00240 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Eupl02g00240 670 Gene3D - 145 251 IPR038408 -
Eupl02g00240 670 Gene3D - 35 139 IPR038408 -
Eupl02g00240 670 FunFam Cysteine-rich receptor-like protein kinase 10 327 431 - -
Eupl02g00240 670 ProSiteProfiles Gnk2-homologous domain profile. 33 139 IPR002902 -
Eupl02g00240 670 FunFam Cysteine-rich receptor-like protein kinase 10 147 251 - -
Eupl02g00240 670 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 42 663 - -
Eupl02g00240 670 SUPERFAMILY Protein kinase-like (PK-like) 339 627 IPR011009 -
Eupl02g00240 670 Gene3D Phosphorylase Kinase; domain 1 319 431 - -
Eupl02g00240 670 Pfam Salt stress response/antifungal 40 136 IPR002902 -
Eupl02g00240 670 Pfam Salt stress response/antifungal 156 249 IPR002902 -
Eupl02g00240 670 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 432 635 - -
Eupl02g00240 670 ProSiteProfiles Gnk2-homologous domain profile. 145 251 IPR002902 -
Eupl02g00240 670 Gene3D Transferase(Phosphotransferase) domain 1 432 641 - -
Eupl02g00240 670 ProSiteProfiles Protein kinase domain profile. 356 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00240 670 SMART serkin_6 356 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00240 670 Pfam Protein tyrosine and serine/threonine kinase 360 557 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00240 Eupl-Chr2 2893130 2896425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00240 37 642 Receptor kinase-like Gene Family AT4G05200 42.857 1.38e-167 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl02g00240 PK_Tyr_Ser-Thr 3.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00240 - - nnu:104590604 717.227